Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g0893 ATGGCGGCCATAACCTGCCTCGTAAAACGCACCCCCTCCCTCTCCTCACCCGTAGCGCGTGCATTCTTCTCCACCAATTCTCACCCCGCGCGTGAGGACAGGAATGTCCAGTGGGTCTTCCTCGGCTCTCCCGGCGTCGGCAAAGGCACCTACGCCAGCCGCCTCTGCACCCTCCTCGGCGTTCCTCACATCGCCACCGGCGATCTCGTTCGCAATGAACTCTCCTCCAATGGCCCCCTTTCTTCCCAGCTATCAGAAATTGTAAATCAAGGTAAATTGGTTTCCGATGAAATTATTATAAATCTATTGTCAAAGAGACTGGCCGCTAGAGAAGCTAATGGCGAATCAGGATTTATTCTTGATGGTTTCCCTCGAACGATGAAGCAAGCAGAAATATTGGAAGGGGTCACTGACATTGACTTGGTGGTCAATCTGAAGCTCCAAGAAGAAGTATTGCTTGCAAAATGCCTTGGTAGGAGAATTTGCAGTCAGTGTGGAAAAAATTTCAATGTTGCCTCCCTGAACATCAAGGGCGAGAATGGGCGCCCTGGAGTGACCATGGCTCCACTTTTTCCTCCGGAGCACTGTATGTCAAAGCTCATTACTCGCTCAGATGACACTGAAGTAGTAATCAAAGAAAGGCTTCGTATATACAATGAAACGAGTCGGCCTGTGGAGGAATTTTACCGCAGTAGAGGAAAGCTCTTAGAGTTTGACCTGCCAGGAGGGATCCCAGAATCTTGGCCAAAGTTGCTGCATGCTCTTAATCTTGATGATTATGAAGAGAAGCAGTCTGCTGCAGCATAA 807 0.4932 MAAITCLVKRTPSLSSPVARAFFSTNSHPAREDRNVQWVFLGSPGVGKGTYASRLCTLLGVPHIATGDLVRNELSSNGPLSSQLSEIVNQGKLVSDEIIINLLSKRLAAREANGESGFILDGFPRTMKQAEILEGVTDIDLVVNLKLQEEVLLAKCLGRRICSQCGKNFNVASLNIKGENGRPGVTMAPLFPPEHCMSKLITRSDDTEVVIKERLRIYNETSRPVEEFYRSRGKLLEFDLPGGIPESWPKLLHALNLDDYEEKQSAAA* 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g0893 268 ProSitePatterns Adenylate kinase signature. 118 129 IPR033690 -
Lja1g0893 268 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 38 255 IPR027417 -
Lja1g0893 268 TIGRFAM adk: adenylate kinase 37 255 IPR006259 GO:0004017|GO:0005524|GO:0016776
Lja1g0893 268 Pfam Adenylate kinase 41 233 - -
Lja1g0893 268 PANTHER ADENYLATE KINASE 14 268 - -
Lja1g0893 268 CDD ADK 37 239 IPR000850 GO:0005524|GO:0006139|GO:0019205
Lja1g0893 268 Gene3D - 24 259 IPR027417 -
Lja1g0893 268 PANTHER NUCLEOTIDE KINASE 14 268 IPR000850 GO:0005524|GO:0006139|GO:0019205
Lja1g0893 268 Hamap Adenylate kinase [adk]. 36 256 IPR000850 GO:0005524|GO:0006139|GO:0019205
Lja1g0893 268 PRINTS Adenylate kinase signature 203 218 IPR000850 GO:0005524|GO:0006139|GO:0019205
Lja1g0893 268 PRINTS Adenylate kinase signature 220 234 IPR000850 GO:0005524|GO:0006139|GO:0019205
Lja1g0893 268 PRINTS Adenylate kinase signature 39 52 IPR000850 GO:0005524|GO:0006139|GO:0019205
Lja1g0893 268 PRINTS Adenylate kinase signature 118 134 IPR000850 GO:0005524|GO:0006139|GO:0019205
Lja1g0893 268 PRINTS Adenylate kinase signature 67 81 IPR000850 GO:0005524|GO:0006139|GO:0019205
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g0893 Lja-Chr1 8756001 8758916 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g0893 K00939 - gmx:102666238 448.743
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g0893 1 8756001 8758916 Lja1g0893 1 8756001 8758916 ECH
Lja1g0893 1 8756001 8758916 Lja5g2719 5 54015126 54019222 PCT