Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g2658 ATGGAAGCAGAGACTTTGAAAGCCTATCACATTCCCAGTTTTCTTCACCCGTCACTTCCAGTTGTTTTGCCTGTGCTTATGATTGCAATAGGATATGTTGACCCAGGAAAATGGGTGGCAGTTGTTGAAGGTGGTTCACGGTTCGGATTTGATCTGATGGCCTTCACACTTATCTTCAGTTTTGCAGCTATCTTCTGTCAGTACATATCAGCAAAAATTGGTGTAATCACGGGAAAAGATCTTGCTCAGATTTGCAGTGATGAATACGATAATTGGACATGCATGCTTCTTGGAGTTCAAACAGAACTTTCAGTGATTATGCTTGACCTTAACATGATGTTGGGCATGGCACATGGGTTAAATATTCTTTTTGGATGGGACTTGTTCACTTGTGTGTTTTTAACTGCTACTGGGGCTGTTTTCCATCTACTTCTTGTTGTCCTCCTTGACATTGAGAAGGTGAAGATCCTAGGCCTGTTTGTGGCAGGTTTTGTGCTGCTTTCTTTTATACTTGGAATCCTCATAAATCAACCAGAAATTCCATTACCAATGAATGGAATAAAAACAAAATTGAGTGGGGAGAGTGCATTTGTGCTAATGAGTCTTCTAGGTGCAACTCTTGTGCCTCACAACTTTTACCTTCATTCTTCTATTGTACAGTGGCATCAGGGATCAACAACCATTTCAAAGGATGCCTTATGTCATAACCATTTTTTGGCCATTATATGTGTCTTCAGTGGCCTTTATTTGGTAAATAATGTACTGATGAATGCTGCAGCAAATGAGTTCTACAGTATGGGTCTTGTTTTGGCTACTTTTCAGGATGCGTTAGCGCCAGTAGAACAGGTGTTGCGGAGTCCGATAGCTCTGCTTGCGTTTTTGCTCATTCTGTTTCTTTCAAATCAAACCGCAGCACTAACTTGGAGTTTAGGTGGAGAAGTAGTTGTGCATCGTTTCTTAAAATTGGATATTCCTGGATGGCTTCATTATGCTACAATTAGAGTAATTGCCGTTCTGCCTGCCCTTTATTGTGTTTGGAGTTCAGGAGCTGAAGGGATGTATCAACTACTTATATTCACTCAAGTGGTGGTAGCTCTGCAACTTCCATCTTCTGTGATCCCCCTTTTCCGTATTGCATCATCTAGATCAATAATGGGTGTACACAAGATCCCACAATTTGTGGAATTTTTAGCATGGGTCATATTTATTGGGATGCTTGGCTTGAATATGGTCTTTGTTGTAGAAATGATATTTGGTAATAGTGATTGGGTGGGAAATTTGAGATGGAATATTGGGAATGGTGTATCTATTTCTTATTTATTTCTTCTCTGCACTGCTTTCGCATCATTCTGTTTGATGCTTTGGTTAGCTTCCACACCATTAAAATCTGCTAGTGTCCAGTCAGATGCTCAGGCATGGAACTGGGACATGCCAAAGGCCATACCAAATACATGGATTGCTAATGAGAAATCAGAGGTAACTGAAACAAGGTATCATGGAGATGAATTTGTTCAGGTAAAGGAACCAACACCAGCTCTAGCAAGGACCCCAGAGTACTCAGATGCACCAGTTGCCAGTTTTCATCCTGATCTCTCTGAAACTATCATGGAGCCTGATCTTCATGTGACTACTGTAAGTGAGACTCATTCAATTACATCATTTCCTTGCTCCCAAACATCTGTTGTGAAGGAATCAGCTTCCACTTCAGAATCAGAGGCAGTGTCAGATGTAATTAGTGAAACGCCTGATATTAGATTGGAAGATGCCAGAAGTTCAGATATGGAAGCACATGCTCCAGTCGAGAAAACTGTAGAAGTTGAGCAGGATTTAAATGCTGAAAGGGATGATGATGATGTAGACTTGTGGGAAACTGAAGAAACATCCAAAGCAGTCTCAGCAAGTGCCCCGTCTTCAGCGTCGGATGGCCCAGCATCATTCAGGAGCCTTAGTGGGAAAAGTGATGATGGGAGTAATAGCATTGGAAGCCTTTCGAGACTTGCAGGTTTAGGCCGTGGCGCAAGGCGTCAGCTAGCTGCTATTCTTGATGAATTCTGGGGACAACTTTATGATTTCCATGGGAAATTTACCACGGACGCTAAGGCTAAGAGGCTGGATGTTTTACTAGGAGTAGATTCGAGGCTCGCCGGCGGCTCTTTGCAGAAAGTGGATTCAAATGCAAAGGAATATTCTGAATACCTAATTCCCGTTGGAAGTAGAGCTCCTGATACTTCAATGAACTCTGCTCCATATGACTCTCCTAGGCAGCATAGGATTCAAAGTAATATGGAGGCTTCCTATGGACTTCAAAGGAACTATTCCTCCTTACGGGCAAATTCCACCCATTTATTAGATGATTATGCACCGACCTCCTGCCGCAATCTTGTTGATGCTGGTGAAAGGCGCTATTCCAGTGTGCGCAATCTGCCATCATCTGGGGTTTGGGATTATCAGCCAGCTACTGTACATGGTTACCAGATTGCATCGTATATGAGCCAGGTTGGTAAAGGCAGAAATTCTGATAACTTAAATGCTCCAATGGAATTGTCTCCCATGAAATCCCCTTCCATGAGTAGTACAAACTACAGGAATTCTATACTTGCTTTGAGGCAAAAGATGCAGAATGGTTTAGGTGCTGGCCAACCCCCTGGCTTTGAAAATGTTTCTACCTCTATGAATTGCCGAATTCCATCTGAGAGGTCCCAATATGACTCTCGCACTTCGGGATCTACAAATAATGCAGTCAGTTCAGTTAATACTAAGAAGTACCACAGCTTGCCAGACATTTTAGGATATGCCATTCCTGCCAGGGATGCTTACATGTCTGATAAGAGTGCTCCATGGGATATTTCTGTTGGTGGATATGGATCTTCTGCAAACATGACTCGATATCAGTCCTCATTATATTCAAATTCTGGATCGAGGACGGGAGCTCCTTTAGCCTTTGATGTACTCTCTCCGACAAAAGTCTACAGTGATGTGCTTTCTTCTCAGTTGAGTTCTGGTTATGGTACTGGATCCCTCTGGTCCAGACAACCTTTTGAACAGTTTGGGGTGGATGATAAAATTCAAAATGTTGCACCAGATGTTGGAAGTAGGCCCAGTACAACTGCTAAAGAAAATACTTCTTCTGTGGATATAGACAACAAACTTCTTCAATCTTTTAGACATTGTATTGTGAAGCTCTTAAAATTGGAAGGGTCTGATTGGTTGTTTAGACAGAATGATGGGGCTGATGAGGATCTGATTGATCGTGTGGCTGCTAGGGAACAATTCATTTATGAAGTTGAAACCACAGAGATGAACCGGGTCAGTCATATGGGAGAAGCTCGTTATTTTTCTTCTGATGGGAAATCTGGTTCTTCAATGAAGAACAACGAGCTAAATTGCTCTAGTTTCTCAGTGTCCTCGATCCCTCACTGTGGGGAGGGATGTGTATGGAGAGCAGACTTAATAATAAGCTTTGGGGTGTGGTGTATCCACCGTGTGCTTGACCTTTCACTCATGGAAAGCCGGCCAGAGCTTTGGGGAAAATACACATACGTGCTCAATCGCCTCCAGGGTGTCATTGATCTGGCATTTTCCAAGCCTCGTAGTCCCATGGCCCCATGTTTTTGCCTTCAAGTTCCCATGGTACACCAGCAAAGGTTAAGCCCTCCTTCTAATGGCATGTTGCCGCCTGCCGCAAAACCAGGCCGGGGAAAATGCACAACCGCATTAGTGGTGCTTGACATGGTGAAGGACGTGGAGATCGCAATCTCTTCCCGGAAAGGTCGCACAGGAACTGCAGCTGGTGATGTAGCTTTCCCGATGGGAAAGGAGAATATGGCATCTGTTCTCAAAAGGTACAAGCGTAGATTACCCAACAAACCAGTTGGCACTCATGAAGGGACTCGCAAGATTCCTACATCAGCACCATACAACTTGTAG 3927 0.4332 MEAETLKAYHIPSFLHPSLPVVLPVLMIAIGYVDPGKWVAVVEGGSRFGFDLMAFTLIFSFAAIFCQYISAKIGVITGKDLAQICSDEYDNWTCMLLGVQTELSVIMLDLNMMLGMAHGLNILFGWDLFTCVFLTATGAVFHLLLVVLLDIEKVKILGLFVAGFVLLSFILGILINQPEIPLPMNGIKTKLSGESAFVLMSLLGATLVPHNFYLHSSIVQWHQGSTTISKDALCHNHFLAIICVFSGLYLVNNVLMNAAANEFYSMGLVLATFQDALAPVEQVLRSPIALLAFLLILFLSNQTAALTWSLGGEVVVHRFLKLDIPGWLHYATIRVIAVLPALYCVWSSGAEGMYQLLIFTQVVVALQLPSSVIPLFRIASSRSIMGVHKIPQFVEFLAWVIFIGMLGLNMVFVVEMIFGNSDWVGNLRWNIGNGVSISYLFLLCTAFASFCLMLWLASTPLKSASVQSDAQAWNWDMPKAIPNTWIANEKSEVTETRYHGDEFVQVKEPTPALARTPEYSDAPVASFHPDLSETIMEPDLHVTTVSETHSITSFPCSQTSVVKESASTSESEAVSDVISETPDIRLEDARSSDMEAHAPVEKTVEVEQDLNAERDDDDVDLWETEETSKAVSASAPSSASDGPASFRSLSGKSDDGSNSIGSLSRLAGLGRGARRQLAAILDEFWGQLYDFHGKFTTDAKAKRLDVLLGVDSRLAGGSLQKVDSNAKEYSEYLIPVGSRAPDTSMNSAPYDSPRQHRIQSNMEASYGLQRNYSSLRANSTHLLDDYAPTSCRNLVDAGERRYSSVRNLPSSGVWDYQPATVHGYQIASYMSQVGKGRNSDNLNAPMELSPMKSPSMSSTNYRNSILALRQKMQNGLGAGQPPGFENVSTSMNCRIPSERSQYDSRTSGSTNNAVSSVNTKKYHSLPDILGYAIPARDAYMSDKSAPWDISVGGYGSSANMTRYQSSLYSNSGSRTGAPLAFDVLSPTKVYSDVLSSQLSSGYGTGSLWSRQPFEQFGVDDKIQNVAPDVGSRPSTTAKENTSSVDIDNKLLQSFRHCIVKLLKLEGSDWLFRQNDGADEDLIDRVAAREQFIYEVETTEMNRVSHMGEARYFSSDGKSGSSMKNNELNCSSFSVSSIPHCGEGCVWRADLIISFGVWCIHRVLDLSLMESRPELWGKYTYVLNRLQGVIDLAFSKPRSPMAPCFCLQVPMVHQQRLSPPSNGMLPPAAKPGRGKCTTALVVLDMVKDVEIAISSRKGRTGTAAGDVAFPMGKENMASVLKRYKRRLPNKPVGTHEGTRKIPTSAPYNL* 1309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g2658 1308 MobiDBLite consensus disorder prediction 627 658 - -
Lja5g2658 1308 MobiDBLite consensus disorder prediction 1284 1308 - -
Lja5g2658 1308 MobiDBLite consensus disorder prediction 581 609 - -
Lja5g2658 1308 MobiDBLite consensus disorder prediction 556 576 - -
Lja5g2658 1308 PIRSF EIN2 1 1305 IPR017187 GO:0009873
Lja5g2658 1308 PRINTS Natural resistance-associated macrophage protein signature 329 346 IPR001046 GO:0016020|GO:0030001|GO:0046873
Lja5g2658 1308 PRINTS Natural resistance-associated macrophage protein signature 97 123 IPR001046 GO:0016020|GO:0030001|GO:0046873
Lja5g2658 1308 PRINTS Natural resistance-associated macrophage protein signature 361 380 IPR001046 GO:0016020|GO:0030001|GO:0046873
Lja5g2658 1308 PRINTS Natural resistance-associated macrophage protein signature 301 320 IPR001046 GO:0016020|GO:0030001|GO:0046873
Lja5g2658 1308 PRINTS Natural resistance-associated macrophage protein signature 199 222 IPR001046 GO:0016020|GO:0030001|GO:0046873
Lja5g2658 1308 Pfam Natural resistance-associated macrophage protein 38 390 IPR001046 GO:0016020|GO:0030001|GO:0046873
Lja5g2658 1308 PANTHER ETHYLENE-INSENSITIVE PROTEIN 2 14 1194 - -
Lja5g2658 1308 MobiDBLite consensus disorder prediction 556 658 - -
Lja5g2658 1308 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 14 1194 IPR001046 GO:0016020|GO:0030001|GO:0046873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g2658 Lja-Chr5 53093374 53101592 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja5g2658 1 1299 Miscellaneous Gene Families AT5G03280 52.914 0.0 1269
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g2658 - K14513 gmx:100801190 2048.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g2658 5 53093374 53101592 Lja5g2658 5 53093374 53101592 ECH
Lja1g0855 1 8338837 8346496 Lja5g2658 5 53093374 53101592 PCT