Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g0855 ATGGAAGCAGAGACATTGAGTACTAACCTCAAGAGTAAATTGGAAGCAGAGACATCAAATCATGACTGCCCACCTGGCTTTGTTCGCCGATCACTTCCTAGTTTTGTACCTATGCTTTTGATTTCATTAGGATATGTTGACCCTGGAAAATGGGTGGCATCTGTCGAAGGTGGTGCAAGGTTTGGTTTTGATCTGATGGCTTTCACACTTATTTTCAATTTTGCTGCTATCTTCTGCCAGTACATATCAGCAAGGATTGGTGTAATCACAGAAAGAGATCTTGCTCAGATTTGCAGTGATGAGTATGATACGTGGACTTGCATGCTCCTTGGAATTCAAGCAGAGCTTTCAGTGATTATGCTAGACCTTAACATGATTTTGGGCATGGCACAGGGATTAAATCTTATTTTTGGATGGGACTTGCTCGCTTGTGTCTTTTTAACTGCTACTGGTGCTATTTTTCATATAGTTCTTGCTGTCTTCCTTGACATTGAGAAGACAAAAATCCTTGGCCAGTTTGTGGCAGGCTTTGTATTGCTTTCTTTTATAGTTGGACTACTCATCAATCAACCGGAAATTCCACTTTCCATGAATGGAATACTAATAAAGTTGAATGGGGAGAGTGCATTTGTGCTAATGAGTCTTCTAGGAGCAACTCTTGTGCCTCACAACTTCTACCTTCATTCATCTATTGTACAGTGGCATCAGGATCCGACAAGTATTTCTAAAGATGCATTGTGTCATAATCATTTTTTGACCATTTTATGTGTCTTCAGTGGTCTTTATCTGGTAAATAATATGCTGATGACGGCATCAGCAAATGAGTTCTACAGTATGGGCCCGGTTTTACTTACTTTTCAAGATGCATTATCACCTCTGGAACAGGTGTTGCGGAGCCCAATAGTTCTGCTTGGGTTTGTACTCATTTTGTTTCTTGCAAATCAAACCACGGCATTAACTTGGAGTTTAGGTGGAGAAGCTGTAGTGCACGGTTTCTTAAAACTGGATATTCCAGGTTGGCTTCATTATGCGACAATTAGAGTAATTGCTGTTGTGCCTGCCCTTTATTGTGTTTGGAGCTCAGGAGCTGAAGGGATGTATCAGCTACTTATATTCACTCAAGTTTTGGTAGCTCTGCAACTTCCATCTTCTGTGATCCCCCTTTTTCGAGTTGCTATGTCTAGATCAATAATGGGTCCAAACAAGGTCTCTCAGTCTGTGGAACTTCTGGCATTGATCATATTCATCGGGATGCTTGGCTTGAATATTGTCTTTGTGATAGAAATGATATTTGGCAATAGTGATTGGGTGGGTGATTTGAGATGGAATGCGGGGAATGGTGTGTCTGTCTCATATTTAGTTCTTCTTACCACTGCATTTACATCATTATGTTCGATGCTTTGGTTGGCTGTCACGCCTTTAAAATCTGCCAATGTCCAATCTGCTCAGGCCTGGAACAGGGATACGCCAGAGATTGTACCAAATCCGTCAGTTGATGGTGAGGAATCATATTTAACTGAAACAAGGTGTCATGAAGATGCATCTGTTGAGGTTGAGGAACCAGCACCAGCTCTAGCAACTACCTTGGAATACTCGGATGTATCACTTAGAAGTTTTCATCCTGATCTACCTGAAACCATAATGGAACCAGATCCCCATGCGAACGCTGTGAGGGAGAATCATGCTATTACATCATCAGCTTCCACATCAGAGTTGTCTGAGGCAGTTTCAACTGTATTTAATGATATTTCTGATTCTACAGTTGAAGATATTTCTGATTCTACAGTAGCAGATTCCAAGATGATAAAAATGGAAACAGGGGCCCCCGTTGAGAAGACTCTGGAAGTTGAAGCAGATGCAAATGCTGAAAGGGATGCTGATGATGGAGACTCGTGGGAAACTGAAGAATCATCCAGAGTGGTCTCAGAAAGTTCCCCATCTTTAACATCAGATGGCCCTGCATCATTCAGGAGCATTAGTGGGAAAGGTGATGAAGGCGGGAATAGCTTTGGAAGTCTTTCAAGAATAGAAGGCTTAGGGCGTGCAGCAAGACGTCAGTTAGCTGCTGTTCTTGATGAATTCTGGGGGAAGCTTTATGATTTCCATGGACTAGCAACCCATGAAGCAAGGGCTAAGAAAATTGATGATTTGCTAGGACTGGGAGCAGATTCAAGACCCACCAGTTCCTTCCAGAGAGTGGATGCATGCGGAAAGGACTATTCTGAATACTCACTATCTGTAGGAGGTAGAACTTCCGACACTCCAATGAACGCTAGTTCATTTGACTCTTCCAAGCAGCCTAGGATGCAAAGTAATTCAGAGTCTCCGTATGGTCTTCAAAGAAGTTCTTCCTCTAGCATGGCAAATCCCATCCAGTTATTGGATGCATATGTACAGAGAAATGTCCTTGATTCTGGTGAGCGGCGCTATTCCAGTGTGCGCAATCTACATTCATCTCAAGCTTGGGACTATCAGCCGGCTACCATACATGGTTATGAGACTGCATCCTATCTTAGCCGGGGTGGTAATGACAGAAATTCTGATAACGTAAGTGCTCCAATGCAATTATCATCACTGAAAACCCCTTCCGTAGGTAATACAAACTACAGGGATTCACTTGCATTTGCTTTAGGGAAAAAGTTGCATAATGGTTCAGGTCTTGGCCAACCACCAGGGTTTGAAAATGTCTCTAGAAATAGCCAATTGCAATCTGAGAGGTCCCAATATGATTTTTGCTCTTCTGGACCTGCAGATAATACTGTCAGTTCAGTTAATACCAAGAAGTACCACAGCTTACCAGACATTTCAGGATACTCCATCCCCCACCGGGCTGGTTATGTATCTAATAAGAATGCTCCACAGGATGGTTCTCTTGGCTATGGATCTTTTGCTAGTAAGACATGTTATGAACCATCATTATATTCAAATTCTGGATCAAGAACAGGAGCTCATTTGGTCTTTGATGAACTCTCTCAAACAAAACTTTACAGAGAGACACTCTCTTCACAGTTGAATTCTGGTTTCAATAGTGGATCCCTTTGGTCTAGACAGCCTTATGAGCAGTTTGGTCTAGCTAATAAAATTCATAATGTTCCAACGGAAGGTGTGGGAAGTAGACCTAATGCAAGTGTTCAAGAAACTACTTTGTCTGTGGATATAGAGGGGAAACTTCTTCAGGCCGTTAGACTTTGCATTATGAAGCTCTTAAAACTGGAGGGCTCTGATTGGCTGTTTAGACATAATGATGGAACTGATGAGGAGCTGATTGATCGTGTAGCTGCAAGGGAGAAATTTGTATATGAAATAGAAACTAGGGAGATGAATCACATGGCAGGTGAATCCCGATTTCCTTCTTCTGATAGGAAATCTGGTTCTTTTGTGAAGAATACTGAAGCAAATTCCTCCAGTTTTTCAGTGTCCTCAGTTCCTAACTGTGGGGATGGTTGTGTATGGAGAGCAGGCTTAGTAATAAGCTTTGGGGTGTGGTGTATCCACCGTATTCTTGACCTCTCACTTATGGAAAGCCGGCCAGAGCTTTGGGGAAAATACACCTATGTGCTCAATCGCCTCCAGGGCATAATTGATCCAGCATTTTCTAAACCTCGGAGTCCCTTGTCACCATGCTTTTGCCTCCAAGTACCCACGACTTATCTGCAACAAAAGTCAAGCCCCCATCTTTCTCTACCCCCAACTGCGAAACCAGGCCGGGGCAAATGCACCACTCCATCAACATTGCTTGAACTGATCAAAGATGTGGAGGTTGCTATCTCTAGCAGGAAAGGACGTACAGGTACTGCAGCTGGTGATGTAGCATTCCCAAAAGGGAAGGAAAATCTGGCTTCTGTGCTCAAACGATACAAGCGAAGATTATCCAGCATTAACAAGCCCGCTGGTGAAGGGTCTGGTTTACGCAAGATGACCTCAGCATCATCATACAGCTAG 3942 0.4287 MEAETLSTNLKSKLEAETSNHDCPPGFVRRSLPSFVPMLLISLGYVDPGKWVASVEGGARFGFDLMAFTLIFNFAAIFCQYISARIGVITERDLAQICSDEYDTWTCMLLGIQAELSVIMLDLNMILGMAQGLNLIFGWDLLACVFLTATGAIFHIVLAVFLDIEKTKILGQFVAGFVLLSFIVGLLINQPEIPLSMNGILIKLNGESAFVLMSLLGATLVPHNFYLHSSIVQWHQDPTSISKDALCHNHFLTILCVFSGLYLVNNMLMTASANEFYSMGPVLLTFQDALSPLEQVLRSPIVLLGFVLILFLANQTTALTWSLGGEAVVHGFLKLDIPGWLHYATIRVIAVVPALYCVWSSGAEGMYQLLIFTQVLVALQLPSSVIPLFRVAMSRSIMGPNKVSQSVELLALIIFIGMLGLNIVFVIEMIFGNSDWVGDLRWNAGNGVSVSYLVLLTTAFTSLCSMLWLAVTPLKSANVQSAQAWNRDTPEIVPNPSVDGEESYLTETRCHEDASVEVEEPAPALATTLEYSDVSLRSFHPDLPETIMEPDPHANAVRENHAITSSASTSELSEAVSTVFNDISDSTVEDISDSTVADSKMIKMETGAPVEKTLEVEADANAERDADDGDSWETEESSRVVSESSPSLTSDGPASFRSISGKGDEGGNSFGSLSRIEGLGRAARRQLAAVLDEFWGKLYDFHGLATHEARAKKIDDLLGLGADSRPTSSFQRVDACGKDYSEYSLSVGGRTSDTPMNASSFDSSKQPRMQSNSESPYGLQRSSSSSMANPIQLLDAYVQRNVLDSGERRYSSVRNLHSSQAWDYQPATIHGYETASYLSRGGNDRNSDNVSAPMQLSSLKTPSVGNTNYRDSLAFALGKKLHNGSGLGQPPGFENVSRNSQLQSERSQYDFCSSGPADNTVSSVNTKKYHSLPDISGYSIPHRAGYVSNKNAPQDGSLGYGSFASKTCYEPSLYSNSGSRTGAHLVFDELSQTKLYRETLSSQLNSGFNSGSLWSRQPYEQFGLANKIHNVPTEGVGSRPNASVQETTLSVDIEGKLLQAVRLCIMKLLKLEGSDWLFRHNDGTDEELIDRVAAREKFVYEIETREMNHMAGESRFPSSDRKSGSFVKNTEANSSSFSVSSVPNCGDGCVWRAGLVISFGVWCIHRILDLSLMESRPELWGKYTYVLNRLQGIIDPAFSKPRSPLSPCFCLQVPTTYLQQKSSPHLSLPPTAKPGRGKCTTPSTLLELIKDVEVAISSRKGRTGTAAGDVAFPKGKENLASVLKRYKRRLSSINKPAGEGSGLRKMTSASSYS* 1314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g0855 1313 MobiDBLite consensus disorder prediction 638 656 - -
Lja1g0855 1313 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 28 1199 IPR001046 GO:0016020|GO:0030001|GO:0046873
Lja1g0855 1313 MobiDBLite consensus disorder prediction 886 916 - -
Lja1g0855 1313 MobiDBLite consensus disorder prediction 608 663 - -
Lja1g0855 1313 Pfam Natural resistance-associated macrophage protein 51 404 IPR001046 GO:0016020|GO:0030001|GO:0046873
Lja1g0855 1313 MobiDBLite consensus disorder prediction 1 21 - -
Lja1g0855 1313 MobiDBLite consensus disorder prediction 890 916 - -
Lja1g0855 1313 PRINTS Natural resistance-associated macrophage protein signature 110 136 IPR001046 GO:0016020|GO:0030001|GO:0046873
Lja1g0855 1313 PRINTS Natural resistance-associated macrophage protein signature 314 333 IPR001046 GO:0016020|GO:0030001|GO:0046873
Lja1g0855 1313 PRINTS Natural resistance-associated macrophage protein signature 342 359 IPR001046 GO:0016020|GO:0030001|GO:0046873
Lja1g0855 1313 PRINTS Natural resistance-associated macrophage protein signature 212 235 IPR001046 GO:0016020|GO:0030001|GO:0046873
Lja1g0855 1313 PRINTS Natural resistance-associated macrophage protein signature 374 393 IPR001046 GO:0016020|GO:0030001|GO:0046873
Lja1g0855 1313 MobiDBLite consensus disorder prediction 746 785 - -
Lja1g0855 1313 PANTHER ETHYLENE-INSENSITIVE PROTEIN 2 28 1199 - -
Lja1g0855 1313 MobiDBLite consensus disorder prediction 840 863 - -
Lja1g0855 1313 PIRSF EIN2 1 1313 IPR017187 GO:0009873
Lja1g0855 1313 MobiDBLite consensus disorder prediction 1293 1313 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g0855 Lja-Chr1 8338837 8346496 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g0855 14 1309 Miscellaneous Gene Families AT5G03280 51.319 0.0 1224
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g0855 - K14513 cam:101495756 1982.61
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g0855 1 8338837 8346496 Lja1g0855 1 8338837 8346496 ECH
Lja1g0855 1 8338837 8346496 Lja5g2658 5 53093374 53101592 PCT