Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g2655 ATGAACCAACTGGTAGAAATGCTTTATAAATATTTTCTTGCTGGAAGTAATTATGAAGATCTGGGGAATTTTATCTTGTCTATCAGTTCCAAGTATTGGGCAAATGCTGGGTCAGCAACGCCCTATGTCATCCTTTGCTGTGTTCTTCTGATTTATTACTCTTACAGAAGCCCAAGGCCCACCAAGCCCACAAGTCCTGGCTCATTGGACAAATCCATGTCGGTACTGTTGGAAGGCGTTCTTCTCGGCATGGGTAATCCTCTCCTCGACATCTCTGCTGTCGTCGATGACGAGTTCCTGCAAAAGTATGATATCAAGCTGAACAATGCGATTCTCGCTGAGGATAAGCACAAATCTATGTATGATGAGATGTCTGCCAAATTTAATGTGGAGTACATTGCTGGAGGTGCTACTCAGAATTCAATCAAGATTGCTCAGTGGTTGCTTCAAGTCCCTGGTGCCACAAGTTACATGGGTTGCATAGGAAAGGACAAATATGGTGAGGAGATGACAAAAAACTCCAAACTTGCTGGTGTAAACGTTCACTATTATGAAGATGAAAACACACCTACTGGAACTTGTGCTGTTTGTGTGGTTGGTGGTGAAAGGTCACTTATTGCCAACTTAGCTGCTGCAAATTGCTACAAGTCTGAGCATTTGAAGAAACCAGAGAACTGGGCATTGGTTGAAAAGGCCAAATATTTCTACATTGCTGGCTTTTTCCTCACTGTTTCTCCAGAATCCATACAATTAGTCGCTGAACATGCAGCTGCAAATAACAAGATCTTCACAATGAACCTCTCTGCTCCCTTTATCTGTGAGTTCTTCAAGGATGCACAGGAGAAAGCTCTGCCGTATATGGACTTTGTTTTTGGGAATGAGACTGAAGCAAGAACATTTTCTAAAGTTCATGGCTGGGAGACTGATAATGTTGAGGAGATTGCCTTAAAGATATCCCAATGGCCAAAGGCATCAGGAACACACAAAAGGATTACTGTTATCACACAAGGTGCAGATCCTGTGTGTGTTGCTGAGGATGGAAAAGTCACATTGTTCCCTGTAATACTATTGCCTAAAGAGAAATTGGTTGACACAAATGGAGCAGGAGATGCATTTGTTGGAGGATTTCTTGCACAGTTGGTTAGGGAGAAGCCTATTAAAGAATGCGTGAGAGCTGGATGTTATGCAGCAAATGTTGTCATCCAAAGGTCTGGCTGCACATACCCGGAGAAGCCTGATTTTGAATGA 1248 0.4271 MNQLVEMLYKYFLAGSNYEDLGNFILSISSKYWANAGSATPYVILCCVLLIYYSYRSPRPTKPTSPGSLDKSMSVLLEGVLLGMGNPLLDISAVVDDEFLQKYDIKLNNAILAEDKHKSMYDEMSAKFNVEYIAGGATQNSIKIAQWLLQVPGATSYMGCIGKDKYGEEMTKNSKLAGVNVHYYEDENTPTGTCAVCVVGGERSLIANLAAANCYKSEHLKKPENWALVEKAKYFYIAGFFLTVSPESIQLVAEHAAANNKIFTMNLSAPFICEFFKDAQEKALPYMDFVFGNETEARTFSKVHGWETDNVEEIALKISQWPKASGTHKRITVITQGADPVCVAEDGKVTLFPVILLPKEKLVDTNGAGDAFVGGFLAQLVREKPIKECVRAGCYAANVVIQRSGCTYPEKPDFE* 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g2655 415 Coils Coil 414 415 - -
Lja5g2655 415 SUPERFAMILY Ribokinase-like 82 408 IPR029056 -
Lja5g2655 415 Pfam pfkB family carbohydrate kinase 100 409 IPR011611 -
Lja5g2655 415 PANTHER ADENOSINE KINASE 2-LIKE ISOFORM X1 77 415 - -
Lja5g2655 415 PRINTS Adenosine kinase signature 140 149 IPR001805 GO:0004001|GO:0006166
Lja5g2655 415 PRINTS Adenosine kinase signature 157 171 IPR001805 GO:0004001|GO:0006166
Lja5g2655 415 PRINTS Adenosine kinase signature 188 203 IPR001805 GO:0004001|GO:0006166
Lja5g2655 415 PRINTS Adenosine kinase signature 226 252 IPR001805 GO:0004001|GO:0006166
Lja5g2655 415 PRINTS Adenosine kinase signature 335 354 IPR001805 GO:0004001|GO:0006166
Lja5g2655 415 ProSitePatterns pfkB family of carbohydrate kinases signature 2. 364 377 IPR002173 GO:0016773
Lja5g2655 415 CDD adenosine_kinase 78 409 - -
Lja5g2655 415 Gene3D - 82 401 IPR029056 -
Lja5g2655 415 PANTHER - 77 415 IPR001805 GO:0004001|GO:0006166
Lja5g2655 415 Gene3D - 89 208 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g2655 Lja-Chr5 53012058 53020996 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g2655 K00856 - rcu:8273533 634.795
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g0845 1 8246217 8249443 Lja5g2655 5 53012058 53020996 PCT