Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g0845 ATGGCGTCGGAAGGCATTCTCCTCGGCATGGGTAACCCTCTTCTCGACATCTCCGCCGTTATTCATCTTACGAATGATTTTTCATTTCACTCTTTTTTTCGTTTCATATATGATATCACCTTGAACAATGCAATTCTAGCGCGCGCAAGACAAGCACAAACCAATGTAACACATTACTTCTCTGTTCTCTGTTCTGTTCATGTGGCATGCATGATGTATGAAGAAATGGCTGAAAAGTTTAATGTGGAATACATTGCTGGAGGTTCCACTCAGAATTCAATCAGGGTTGCTCAGTGCCTGGTACGATCGACGAGTTACATTGGAAAGGATAAGTTTGGAGAAGAGATGAAAAAGAGCTCAGAACTTGATGGTGTAAATGTTCACTACTATGAAGATGACGCTGCACCTACCAGAACTTGTGCTGTTTGTGTAATGGGTGGGGAAAGGTCTCTTGTTGCCAACTTATCAGCTGCAAATTGTTACAAGTCTGAGCATTTGAAGAGACTAGAAAATTGGGCATTAGTTGAAAAAGCCAAGTATTACTATATTGCTGGCTTTTTCTCCACCGTATCACCAGAGTCCATCCAATTAGTTGCTGAACATGCTGCTGCCAATAACAAGGTCTTCATGATGAACCTTTCTGCCCCTTTTATCTGCGAGTTCTTCAGGGATGCACAGGAAAAAGCGCTTCCGTATATGGATTTTGTTTTTGGAAATGAGATTGAAGCAAGAACATTCTCTAAAGTTCACAGCTGGGAGACTGACAATGTGGAGGAGATAGCTCTAAAGATTTCCCAATGGCCAAAGGCATCAGGAACACACAAAAGGATAACTGTTATCACACAGGGTGCTGATCCTGTTTGTGTTGCTGAGGATGGGAAGGTGAAAAAATTCCCTGTGGTGCTATTGCCTAAAGAGAAGCTAGTGGACACAAATGGAGCAGGAGATGCTTTTGTGGGAGGATTTCTTTCACAGTTGGTTCAGGAGAAGCCTATTGAAGAATGTGTGAGAGCTGCTTGTTATGCAGCAAACGTTATCATCCAAAGGTCTGGCTGCACATACCCAGAGAAGCCTGATTTTCATTGA 1086 0.4263 MASEGILLGMGNPLLDISAVIHLTNDFSFHSFFRFIYDITLNNAILARARQAQTNVTHYFSVLCSVHVACMMYEEMAEKFNVEYIAGGSTQNSIRVAQCLVRSTSYIGKDKFGEEMKKSSELDGVNVHYYEDDAAPTRTCAVCVMGGERSLVANLSAANCYKSEHLKRLENWALVEKAKYYYIAGFFSTVSPESIQLVAEHAAANNKVFMMNLSAPFICEFFRDAQEKALPYMDFVFGNEIEARTFSKVHSWETDNVEEIALKISQWPKASGTHKRITVITQGADPVCVAEDGKVKKFPVVLLPKEKLVDTNGAGDAFVGGFLSQLVQEKPIEECVRAACYAANVIIQRSGCTYPEKPDFH* 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g0845 361 Gene3D - 74 361 IPR029056 -
Lja1g0845 361 SUPERFAMILY Ribokinase-like 72 354 IPR029056 -
Lja1g0845 361 Pfam pfkB family carbohydrate kinase 74 355 IPR011611 -
Lja1g0845 361 ProSitePatterns pfkB family of carbohydrate kinases signature 2. 310 323 IPR002173 GO:0016773
Lja1g0845 361 PRINTS Adenosine kinase signature 281 300 IPR001805 GO:0004001|GO:0006166
Lja1g0845 361 PRINTS Adenosine kinase signature 92 101 IPR001805 GO:0004001|GO:0006166
Lja1g0845 361 PRINTS Adenosine kinase signature 172 198 IPR001805 GO:0004001|GO:0006166
Lja1g0845 361 PANTHER ADENOSINE KINASE ISOFORM 1T 1 360 - -
Lja1g0845 361 PANTHER - 1 360 IPR001805 GO:0004001|GO:0006166
Lja1g0845 361 CDD adenosine_kinase 4 355 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g0845 Lja-Chr1 8246217 8249443 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g0845 K00856 - tcc:18586420 549.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g0845 1 8246217 8249443 Lja1g0845 1 8246217 8249443 ECH
Lja1g0845 1 8246217 8249443 Lja5g2655 5 53012058 53020996 PCT