Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g2557 ATGGCTACTGGTAAATGGAATTGTTCAACTTCAAATGCATCTTCTTCCTTGAAGCTGTTGGTGTCCATGGTGCCTCTAATCTTGATTGTGGGGCTTGTTTTTGTTCTGGGTTCTGGGTTTTGCAACTGGGATTTTACTGGGAAAAGTAGTCCTCTGTTTTGGAATTCTGTTTCTTCTTCTGCTTCTTCTTTTGATGGGAAACAGAGATCAGAAGGGGTTTTGGATTTGAGGTCTGAAGCGGTGGTGGAAGTGGGTGGTTCTGAGAAGAGCAAAGAGAACAAAGCTATTATGATTAATGCATCTTCTTCACCCACAATTCCTGTTCAGGAAAACATGCAAACACTTCAACAATCTAATGAAAGTCTCAATGTTTCCATACCTTGGCCTAAAATAGCTCCTGGCAATGAAACTTATGTACCTCTGCTGACAAAGAAGCAGCAAAAGTTCAGCATCTTGGATAGAACAGAAGCCAGGCTACTTCGAGCTCGAGCTGCCATTAGAGAAGCCAGAAACAGGAGTGAGATACAAGATCCAGATTATATTCCTGTAGGTCCAATGTATAGGAATGCTAAGGCATTTCACAGGAGCTACATAGAAATGGAGAAACAATTCAAGGTATTCGTCTACGAAGAAGGTGAGCCTCCAGTTTTTCACAATGGACCTTGCAAAAGCATATACTCCATGGAGGGGAACTTCATCCATGCTATGGAGATGAATGACAAATTTCGAACAAGAGATTCCGAAAAAGCACATGTATTTTTCCTTCCTTTCAGTGTAGTAATGATGGTCCGATTCGTGTACATAAGGGACTCCCATGATTTTGGCCCCATAAGAAAAACTGTCACTGACTATATCAATGTCATTGGTGAGAGATATCCCTATTGGAACCGAAGCCTTGGAGCTGATCATTTCATGCTTGCTTGTCATGATTGGGGCCCAGAGGCTTCATTCTCTACACCTTACCTACACAAGAACTCGATTCGGGTGCTTTGCAATGCCAACACCTCTGAAAGGTTCAACCCTGCAAAGGATGTTTCTTTCCCTGAAATCAATCTCCAAACTGGTTCAATAAATGGTTTCTTAGGTGGGCCATCTGCATCTAAACGTTCAGTTTTAGCATTCTTTGCTGGAGGGCTTCATGGTCACATAAGGGCTGTTCTTCTTGAGCATTGGGAAAACAAAGATGAAGATATCCAGGTCCGCCAGTACCTTCCGAAGGGTGTTTCTTACTACGCGATGCTGAGGAAGAGCAAGTTCTGCCTCTGCCCCAGCGGGTACGAGGTGGCGAGCCCGAGGGTGGTGGAGGCAATATACACCGGGTGCGTCCCGGTGCTCATTTCGGAGCACTATGTCCCTCCGTTCAACGATGTTTTGAACTGGAAGTCTTTCTCAGTTGAGATCTCTTTGAAGCACATATGTCCCTCCGTTCAACGATGTTTTGAACTGGAAGTCTTTCTCAGTTGA 1464 0.4419 MATGKWNCSTSNASSSLKLLVSMVPLILIVGLVFVLGSGFCNWDFTGKSSPLFWNSVSSSASSFDGKQRSEGVLDLRSEAVVEVGGSEKSKENKAIMINASSSPTIPVQENMQTLQQSNESLNVSIPWPKIAPGNETYVPLLTKKQQKFSILDRTEARLLRARAAIREARNRSEIQDPDYIPVGPMYRNAKAFHRSYIEMEKQFKVFVYEEGEPPVFHNGPCKSIYSMEGNFIHAMEMNDKFRTRDSEKAHVFFLPFSVVMMVRFVYIRDSHDFGPIRKTVTDYINVIGERYPYWNRSLGADHFMLACHDWGPEASFSTPYLHKNSIRVLCNANTSERFNPAKDVSFPEINLQTGSINGFLGGPSASKRSVLAFFAGGLHGHIRAVLLEHWENKDEDIQVRQYLPKGVSYYAMLRKSKFCLCPSGYEVASPRVVEAIYTGCVPVLISEHYVPPFNDVLNWKSFSVEISLKHICPSVQRCFELEVFLS* 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g2557 487 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 100 472 IPR004263 GO:0006486|GO:0016757
Lja5g2557 487 PANTHER EXOSTOSIN FAMILY PROTEIN 100 472 - -
Lja5g2557 487 Pfam Exostosin family 201 472 IPR040911 -
Lja5g2557 487 Coils Coil 152 172 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g2557 Lja-Chr5 50225011 50229897 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g2557 - - gmx:100806278 629.017
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g2557 5 50225011 50229897 Lja5g2557 5 50225011 50229897 ECH
Lja1g0766 1 7433318 7437961 Lja5g2557 5 50225011 50229897 PCT