Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g0766 ATGTTGCCTCTTGTACTTGTTGCTGCACTAATTTGTGTAAAGGGTCCTAACCCCTCAAGTTGGTTTCTAGTTACTACCAACCCACCTCTCTTATTAAACTCTGTTATTCCCTCTGCTTCAAAAAATGGTAGTGGTGGTGGTGTGAGCACTATGGAATTGGAGAACAAAAATGAAGAAGGTTTCAATGTCTCCAAAAATTTGCCTAACATGGCCCCTGAGAATGAATCTTATGTTCCTCCAGAGAGACCAAAGCAGCAGAGGAAGTATAGCATCTTAGATAGAACAGAAGCTGGGCTACTACAAGCTAGAGCTGCAATAAGAGAAGCAAGAAATGGGAACCAAACACAAGATATGGACTATGTTCCTGTTGGACCAATGTATCATAAAGCTAATGCATTTCACAGAAGTTACTTAGAAATGGAGAAACAGTTCAAGGTATTTGTCTATGAAGAAGGGGAGGTACCAATTTTCCATAATGGACCTTGCAGAAGCATATATTCATCAGAGGGAAATTTCATCAATGCTATTGACATGAATGACCATTTCAGAACAAGGGATCCTGAAAAAGCACACGTATTTTTCCTTCCTTTCAGTATAACAAATATGGTCCAATATCTCTATGTACCTGATTCTCTTGATCGTAGCCCCATACAAAAAACTGTGAAGGACTATGTCAATCTCATTGTTCAAAGATACCCCTTTTGGAACAGAAGCCTAGGAGCTGATCACTTCATGCTTTCTTGCCATCAGGGGCGGACCCACAGCCAAGGGCCTATGGCTTCAAAGGCTGTTCCTAACTTGTACAAGAATTCGATTCGTGTTCTCTGCAATGCTAACACAACTGAAGGATTCAAGCCTGGAAAGGATGTTTCTTTTCCAGAAATCAATATTCTAACCGGTGGTTCAATAGCCAGTTTGGTTGGAGGTACATCGGCATCAAAGCGTTCGGTTTTGGCTTTCTTTGCTGGTGGGCTTCATGGGCCTATTAGGCCTGCACTTCTTGAGCATTGGGAAAACAAAGATGAAGACATGCAGGTTCACAAGTACCTTCCAAAGGGTGTTTCCTACTATGACATGTTGAGAAAGAGCAAGTTCTGCCTTTGCCCAAGTGGTTATGAGGTTGCAAGCCCAAGAGTGGTGGAAGCTATCTACACAGGTTGTGTCCCAGTACTCATGTCAAATTCTTATGTTCCTCCATTCAGTGATGTCTTGAATTGGAAATCATTCTCCCTTGAGGTTTCAGTGAAGGACATTCCTAGGTTGAAGGAAATTCTTTTGAGTGTTACTCCAAGGCAGTATATAAGAATGCAGAGAAGAGTGGGACAAATTAGGAGACACTTTGAGGTACATTCTCCTCCTAGGAGATTTGACATGTTCCACATGGTCCTTCATTCTGTATGGCTTAGAAGATTGAACTTCAGAATCCACGATGATCAATAA 1440 0.4167 MLPLVLVAALICVKGPNPSSWFLVTTNPPLLLNSVIPSASKNGSGGGVSTMELENKNEEGFNVSKNLPNMAPENESYVPPERPKQQRKYSILDRTEAGLLQARAAIREARNGNQTQDMDYVPVGPMYHKANAFHRSYLEMEKQFKVFVYEEGEVPIFHNGPCRSIYSSEGNFINAIDMNDHFRTRDPEKAHVFFLPFSITNMVQYLYVPDSLDRSPIQKTVKDYVNLIVQRYPFWNRSLGADHFMLSCHQGRTHSQGPMASKAVPNLYKNSIRVLCNANTTEGFKPGKDVSFPEINILTGGSIASLVGGTSASKRSVLAFFAGGLHGPIRPALLEHWENKDEDMQVHKYLPKGVSYYDMLRKSKFCLCPSGYEVASPRVVEAIYTGCVPVLMSNSYVPPFSDVLNWKSFSLEVSVKDIPRLKEILLSVTPRQYIRMQRRVGQIRRHFEVHSPPRRFDMFHMVLHSVWLRRLNFRIHDDQ* 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g0766 479 PANTHER EXOSTOSIN FAMILY PROTEIN 44 476 - -
Lja1g0766 479 Pfam Exostosin family 141 426 IPR040911 -
Lja1g0766 479 MobiDBLite consensus disorder prediction 60 85 - -
Lja1g0766 479 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 44 476 IPR004263 GO:0006486|GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g0766 Lja-Chr1 7433318 7437961 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g0766 - - gmx:100806278 730.709
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g0766 1 7433318 7437961 Lja1g0766 1 7433318 7437961 ECH
Lja1g0766 1 7433318 7437961 Lja5g2557 5 50225011 50229897 PCT