Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g2536 ATGGAGGTTGAGGAAATGGACAGAGACAAGGTGGAGGTTGGGATTCCATGGATCCCCAACACACCCATTAAGCTTTCTGGTCCAAAACCAGCTCCGATCTGCACGGCGGCGGAGGAAAACCATCTGGGTCACCGTGCCAATGAAGCAGTTGCATGCGGTGAAGAAAAAGACAAAAGGGTCACCTGTGATGACGTGTCAGTGCCGGTGACAGAGGTTGCTGGTGAGAGTGGTAAAACTGGGGAACAGACAGGTTCTGATGATGTTTTTTCCGGCTGGAGAAATTTTGTCTCTTCTGAATTTTCTTTTCCGGCAGAAACAGCATCGGCAGATTCTTGTGCTACACCATCAGGCAATAACAATGGGTTGAACAATTCCCAGGATCTTCAGGAAACATCAGACAATGCTTGCTGTAGCACTGCGCTGACACCGGATGATTCCATGAAAGCAGAGAGTAGAGAGCCTGCATCTACACAGGTCAATATGGAAGGAAAGGAAGCAGGAAAGGAAGAGGAGAATGTCCCTGCCAAAAAACTTGACAATGATGGAGCCCCACCCAATGAAGGACTTAATGACTCTGTCATAGAGTTTTCTGCTGTTTCTTCATCATTGAAGGAGAACCACGACCTTGATAAGGGAAGTGGCCAAATTACGGATCTGAATCAAACACCGGCTCAAAAGCCGAAGAGAAGAAAGCACCGTCCCAAGGTCATCGTAGAAGGGAAACCCAAGAGACCTCGGAAGCCAGCTACTCCAAAGCCTGTTCAACCAAAAGTAAACTCAACTGGGAAGCGAAAGTATGTGAGAAAGACAGCGTTGAACAAGACTTCGACTCCTCCCACAGAAGTGACTGGAGAGTTTGCTAAAGAAGTGCCTGAGTCTCCCAAAAGCTCTTGTAGAAGATCCTTAAATTTTGATGTAGAAACTAGAGATGAAAGTTGTGCGGGAGGAGAAAATACAACGGCAGGTCTCAATGTAGGCGCTGCATGTGATTCAAATGCTTCAATAAAGCAGGCATCAACTGGGAAGCGAAAGTATGTGAGAAAGACAGGGTTGAACAAGACTTCGACTCCCCCCGCAGAAGTGACTGGAGAGGTCGCTAAAGAAATGCCCGAATCTCCCAAAACGTCTTGTAGAACATCCGTAAATTTTGACACAGAAGCTAAAGATGAAAGTTGTGCAGGAGGAGAAAATACAACGGAAGTTCTCAATGCAGACGTTGCATGTGATTCAAATGCTTCAATAAAGCAGGCATCAACTGGGAAGCGAAAATATGTGAGAAAGACAGCGTTGAACAAGACTTCGACTCCCCCCGCAGAAGTGACTGGAGAGGTCGCTAAAAAAGTGCCTGAATCTCCCAAAATGTTTTGTAGAACATTCGTAAATTTTGACACAGAAGCTAAAGATGAAAGTTGTGCAGGAGGAGAAAATACAACGGAAGTTCTCAATGTAGACCTGGCATATGATTCAAATGCTTCAATCAAGCAGGCATCAACCGGTTGCATGTCATTACCAGAAGATACACAAGCCCCAATTGCATCTCCTTCGAGAAGAACCAGCCCTGGGGCAAAGCCAACAGAAAAGACAACTAGCAAGAGGAAGTATGTGAGAAAGAAAGGATTGAATAAGACTTCAGCTCCTGCAACAGAGACACTAGCAAGAGAAGAAAGTTCTACTGTCAAAGAAAATGCAACTGAACATCTGGGCAGTGTAGTCACGCAGGAAATGAGCGCGAACCTTGCCTATGAATTGAACATTTCCCTGGAGCAGGCATCAAACATGTACAAGTTATTAGCAGACGGTACAGATGCCACAAATACATCTTCAGGAAGAAACCCACGTGAGGCAAAGCCAAAAGAAAACCCAACTGCCAAGAGGAAGCGTGTGAGGTCAGGATTGAAGAAGTCTTCCACTCCTACAGAAGCGACTGGAGAATTGATTAAAGAAATGGTGCCCAAATCTTCCAAAACTTGTAGAAAATCCTTAAATTTTGACAAAGGAGATGGAAGTTCCGCAGACAAAGAAAATGTCAAGCGGAAATATGTGAGAAGAAAAGGACTGGATAAGTCTCCTACTCCAACAGTAATGGCAGGAGAAATGACGGAACCAATGATGACAGAGTCTAAAAACTTAGATGTTGGCAATGAAAAATATGTGGTGGTAGAGGAAACACCCGTAGGCGTTGCCTATACTGAAGATGCTTGGATGAGTCTGGCATTAAATAATTGCATGTCATTACCTGGAGACAAACTAGCCCTGAGTACATCTCCTTCAGAAAGCGATCCCCCTGGAGAAAAGACAAGAGAAGGCCCAGCTTGCAAGAGGACGTATGTGAGAAGGAAAGGACTGAATAAGCCTCCTACTCCAACAGTAACAACAGGAGAATTAACTGAACCTGTTATGCCTGGAACTACCATAATATCATGTAGAAGTCCTGCTCATGATAAAAACACTTTGGTGAATGATGCACTATATAATTACATGTCATTACCTGAAGACAGTCAAGCTGTCAGTACATCTCTTTCAAAAAGCAATCCACTTGAAGCAAGCCTTAATGCCAACTCTCAGGATGGAAATATCAGTAGCGCTCAAATTTCAACAATAAGGTCACAAATGGTTGGTTCCAAGAGAAAACAACCTGGTACCATTAAATGTGCAGATAACAGCGGCATGAACCTGACTGGAGCACACTATAACGGATTGCCCTCATACCAGTCAAAGTTTTGGGTCGAGTTTCCAAATATTCAGAGGAAAAGGAGAACTGGAAAGGGGAAAACATCAGACACTCATATTACATCTTCGGTGACTCCCGAAAAAGAACTGCAACTAACATACACTCAAGAAGATGCTCAAGAGCATCCTTATGCATCCAATTCCAGCTGCTGGATTTATGGTTCTGGATACAATGCAGCTATAATCCCAGGCATAAGTGCATCAACAGAAAATGTTATTGGTAATACTCAAATGAATGATGAGTATCACGAGTACTTGTTATCGTTGAGGAGGCTGACAGAAAGATCTCGATTCTCAACTCAAACTTGGGATTGTAATTCTCTAATGGGAATTACAAACTGTGTTTCTGAACAAAATTATACTGCAAAACGACTAGGCATTTCAGACTGGCTAACATTTGGAGTTGCAGATAGACCGCAGACATGCATTAATGCTTTAGTTGCAGAGAAGGAAGTCTCCCTTGCCAAAAAGAAGAGAAATATAAAGAAAGGCGCTCCTTCCAGTTCAGCATATCCTAGCACAAATGAGATGCAACAGAACGATAATTTGGCATTAACAAACCACTTCCTGCCATTCCTGCCATTGGGGAAGTTATCAGATGCTGCTCCTGTGAAGAGAAATAGAAAGAAAGACGCTCCTTCTGGTTCAGCATATCCTAGCACAAATGAGATGCAACAGAACCATAATTTAGCATTAACAACTCACTTTCTGCAATTGGAGAAGTCATCAGATGTTGCTCCTGTGAAGAGAAATAGAAAGAAAGAGGCACCTTCCAGTTCAGCATATCCTAGCACAAATGAGATGCAACAGAACCATAATTTAGAATTAACGACTCACTTCCTGCCATTGGAGAAGTCATCAGATGTTGATATCGAAGCATTAGCAGAGCAATTTAGACAGCTAAACATCAGCACAGACCAGCATGCACTTGTTCCCTTTCAGGGCTCATTTATCAAAAAACATCATCCACGACCGAAAGTTGACCTTGATGAGGAGACAGATAAAGTGTGGAAGCTTTTGATGTTAGATATAAACAGTCATGGAGTTGATGGAACAGATGAAGACAAGGCCAAATGGTGGGAAGAAGAACGAAATGTATTCCGTGGACGAGCAGACTCATTTATTGCACGAATGCATCTAGTACAAGGAGACAGGCGATTTTCTCGATGGAAAGGATCAGTTGTGGATTCAGTGGTAGGAGTTTTCCTCACTCAAAATGTGTCGGACCATCTTTCCAGTTCGGCATATATGTCCCTTGCTGCTCGGTTCCCCCCAAAGCCAAGCAGCATGCGGAAAACATGCCACGGTGAAGGCACAAGCTTGGAAGTCAATGAACCACAAGTGCAGATAGTGGAACCGGAAGAGAACACAGAATGCGATGTCAAATTACTGAATCAATCTCTTCATGACCAGAGTTTTACGACTATAGATATAGCTAAGCATTCTGGAGAAAAAGAAGCTGTAGAGAGCAATGATTCCTGCAGAATTACCAGTAGTGTAACAGATGAATCAAACTGCAGACTGCCAGATTCATCTCAAAGAAATATTAAGGAACACCAAAGTCCAATGAGGAGTGGACTAATTAGCACTTCAATTGAGGAATTGGAAGATAAATCATGTTATGACAGTGCTGGGTTAGAGTCAAATGTAGTTTCATCCCAATGCTCTGTCATTTCATCTCAAATATCCGGAGATTTCTCAAATGATCAAAATCCTGAGAAGATAGGATCATCCTCTGATAGCAACTCAGAAATAGAAGATCTCTCCAGCACAGCTATGTACAACAGTGTTTATAGTGGCACTTCCTTTAGCAAGCTTCTAGAAATAGTAAGTTCAACCAAGTTTCATGAAGTTAACAGTGAAAAAAGCCCGACAGAACCAAATACTGCTCAAATTGCACTTGGTCATTCTCAAACTATTGCATCTCAAGTCTATCCTCAGGAACAAAGCAGTCACATGCAGCAAAGCTTTTTCAACATTTCTGAACAAACTCAAGATCTTGTGAACAAAGAAAGGGGATTGGATCTTGGTGACCATAAAGATACTGCGAGGAGTGAAACCAATGAGATAAGTTCCACCCCAATAACATTAAAGAGCAAAGGACAAGGAAAGGAGAAACAGGAAGAGGTTGACTGGGATAGTTTAAGATTAACAGCGCAAGCCAAGGCAGGGAAAAGAGAAAGAACTGAAAACACCATGGATACCTTGGACTGGGATGCTGTTAGATGTGCTGATGTCAATGAGATTGCTAATACCATCAAAGAACGTGGCATGAACAACAGGCTTGCAGAACGTATTCAGGGTTTTTTGAATCGACTGGTTGAAAAACATGGAAGCATTGACCTTGAGTGGCTGAGAGATGTTCCACCTGACCAAGCAAAAGAATACTTGCTCAGCTTCAGAGGACTGGGATTGAAAAGTGTGGAGTGTGTGCGGCTTTTAACACTGCACCATCTTGCCTTCCCGGTGGACACAAACGTTGGACGTATAGCAGTACGACTGGGATGGGTACCTCTCCAGCCACTGCCTGAGTCACTACAGTTGCATCTCCTAGAAATGTACCCTGTGTTGGAGTCCATACAAAAATATCTATGGCCTCGACTGTGCAAGCTAGATCAAAGAACATTGTATGAGCTACATTACCAGATGATTACATTTGGAAAGGTCTTCTGTACAAAAAGCAAACCAAATTGTAATGCATGCCCAATGAGAGCAGAATGTAGACACTTTGCTAGTGCATTTGCAAGTGCAAGGCTTGCCCTGCCTGGACCAGAGCAGAAGAGTATAGTTACCACAGCTGGAAATAGTGCGACTGATCAGAATCCATCAGTACTCATCAATCAGTTGCGGTTGCCTCTCCCTGAAAACACAACGCAAGCAGAAGAAATTCACCAAACAGAAGTGAGCAGACAACTACAATTGAAATCTGAAATAAATATCTGCCAACCTATCATTGAAGAGCCGACATCTCCAGAGCCAGAATGCTCACAAGTATACCTAAGTGATATAGAGGATGCCTTCAATGAGGATTCATGTGAAATTCCAACCATCAAACTTAACATTGAAGAGTTCACTTTGAATTTGCAAAATTATATCCAACAAAACATGGAACTTCAAGAAGGTGAAATGTCAAAGGCTTTGGTTGCTTTGGATCCACAAGCTGCCTCCATTCCTATGCCCAAGCTAAAGAACGTGAGCAGATTACGAACAGAACATTGTGTTTATGAGCTCCCAGATACGCATCCTCTTCTGGAAGGGTGGGACGTGCGAGAGCCTGATGATCCAGGCAAATACCTTCTTGCTATATGGACACCAGGTGAGACAGCAAATTCAATACAACCACCTGAAAACAAATGCAGCTCTCAAGAAGAATGTGGCCAACTCTGCAGCGAGAAAGAATGTTTCTCATGCAACAGTTTCCGTGAAGCAAATTCACAGATAGTTAGAGGGACAATCCTGATACCATGTCGAACAGCTATGCGGGGGAGCTTTCCACTAAATGGCACTTATTTCCAAGTCAATGAGGTATTTGCTGACCATGACTCAAGTCATGAACCAATTAGTGTTCCCCGAAGTTGGCTCTGGAACCTCAACAGACGTACAGTATATTTTGGAACCTCCATACCAACAATATTTAAAGGTTTATCAACACAAGATATTCAACAGTGCTTCTGGAGAGGATATGTCTGTGTGAGGGGTTTTGACAGGATATCACGAGCACCCCGGCCTCTGATGGCCAGGCTCCACATGCCAGCCAGCAAATTGCCCAAGCCCCAGCCTAAAGAGAAGCCAAAAAAAGAGCCTAAACAGAAGACAAAAAAAGAGTCAAGTTCGGCGAAAGGACAAGGACCGGAACCAAATCCAAAACTTCCAGAATTGGTTTCTAGCAGTCACGACCTTCAGAACAGGAAAACAGCCTGA 6651 0.4321 MEVEEMDRDKVEVGIPWIPNTPIKLSGPKPAPICTAAEENHLGHRANEAVACGEEKDKRVTCDDVSVPVTEVAGESGKTGEQTGSDDVFSGWRNFVSSEFSFPAETASADSCATPSGNNNGLNNSQDLQETSDNACCSTALTPDDSMKAESREPASTQVNMEGKEAGKEEENVPAKKLDNDGAPPNEGLNDSVIEFSAVSSSLKENHDLDKGSGQITDLNQTPAQKPKRRKHRPKVIVEGKPKRPRKPATPKPVQPKVNSTGKRKYVRKTALNKTSTPPTEVTGEFAKEVPESPKSSCRRSLNFDVETRDESCAGGENTTAGLNVGAACDSNASIKQASTGKRKYVRKTGLNKTSTPPAEVTGEVAKEMPESPKTSCRTSVNFDTEAKDESCAGGENTTEVLNADVACDSNASIKQASTGKRKYVRKTALNKTSTPPAEVTGEVAKKVPESPKMFCRTFVNFDTEAKDESCAGGENTTEVLNVDLAYDSNASIKQASTGCMSLPEDTQAPIASPSRRTSPGAKPTEKTTSKRKYVRKKGLNKTSAPATETLAREESSTVKENATEHLGSVVTQEMSANLAYELNISLEQASNMYKLLADGTDATNTSSGRNPREAKPKENPTAKRKRVRSGLKKSSTPTEATGELIKEMVPKSSKTCRKSLNFDKGDGSSADKENVKRKYVRRKGLDKSPTPTVMAGEMTEPMMTESKNLDVGNEKYVVVEETPVGVAYTEDAWMSLALNNCMSLPGDKLALSTSPSESDPPGEKTREGPACKRTYVRRKGLNKPPTPTVTTGELTEPVMPGTTIISCRSPAHDKNTLVNDALYNYMSLPEDSQAVSTSLSKSNPLEASLNANSQDGNISSAQISTIRSQMVGSKRKQPGTIKCADNSGMNLTGAHYNGLPSYQSKFWVEFPNIQRKRRTGKGKTSDTHITSSVTPEKELQLTYTQEDAQEHPYASNSSCWIYGSGYNAAIIPGISASTENVIGNTQMNDEYHEYLLSLRRLTERSRFSTQTWDCNSLMGITNCVSEQNYTAKRLGISDWLTFGVADRPQTCINALVAEKEVSLAKKKRNIKKGAPSSSAYPSTNEMQQNDNLALTNHFLPFLPLGKLSDAAPVKRNRKKDAPSGSAYPSTNEMQQNHNLALTTHFLQLEKSSDVAPVKRNRKKEAPSSSAYPSTNEMQQNHNLELTTHFLPLEKSSDVDIEALAEQFRQLNISTDQHALVPFQGSFIKKHHPRPKVDLDEETDKVWKLLMLDINSHGVDGTDEDKAKWWEEERNVFRGRADSFIARMHLVQGDRRFSRWKGSVVDSVVGVFLTQNVSDHLSSSAYMSLAARFPPKPSSMRKTCHGEGTSLEVNEPQVQIVEPEENTECDVKLLNQSLHDQSFTTIDIAKHSGEKEAVESNDSCRITSSVTDESNCRLPDSSQRNIKEHQSPMRSGLISTSIEELEDKSCYDSAGLESNVVSSQCSVISSQISGDFSNDQNPEKIGSSSDSNSEIEDLSSTAMYNSVYSGTSFSKLLEIVSSTKFHEVNSEKSPTEPNTAQIALGHSQTIASQVYPQEQSSHMQQSFFNISEQTQDLVNKERGLDLGDHKDTARSETNEISSTPITLKSKGQGKEKQEEVDWDSLRLTAQAKAGKRERTENTMDTLDWDAVRCADVNEIANTIKERGMNNRLAERIQGFLNRLVEKHGSIDLEWLRDVPPDQAKEYLLSFRGLGLKSVECVRLLTLHHLAFPVDTNVGRIAVRLGWVPLQPLPESLQLHLLEMYPVLESIQKYLWPRLCKLDQRTLYELHYQMITFGKVFCTKSKPNCNACPMRAECRHFASAFASARLALPGPEQKSIVTTAGNSATDQNPSVLINQLRLPLPENTTQAEEIHQTEVSRQLQLKSEINICQPIIEEPTSPEPECSQVYLSDIEDAFNEDSCEIPTIKLNIEEFTLNLQNYIQQNMELQEGEMSKALVALDPQAASIPMPKLKNVSRLRTEHCVYELPDTHPLLEGWDVREPDDPGKYLLAIWTPGETANSIQPPENKCSSQEECGQLCSEKECFSCNSFREANSQIVRGTILIPCRTAMRGSFPLNGTYFQVNEVFADHDSSHEPISVPRSWLWNLNRRTVYFGTSIPTIFKGLSTQDIQQCFWRGYVCVRGFDRISRAPRPLMARLHMPASKLPKPQPKEKPKKEPKQKTKKESSSAKGQGPEPNPKLPELVSSSHDLQNRKTA* 2217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g2536 2216 Gene3D Hypothetical protein; domain 2 1627 1728 - -
Lja5g2536 2216 MobiDBLite consensus disorder prediction 601 675 - -
Lja5g2536 2216 MobiDBLite consensus disorder prediction 226 240 - -
Lja5g2536 2216 MobiDBLite consensus disorder prediction 761 775 - -
Lja5g2536 2216 MobiDBLite consensus disorder prediction 612 626 - -
Lja5g2536 2216 MobiDBLite consensus disorder prediction 503 562 - -
Lja5g2536 2216 MobiDBLite consensus disorder prediction 1472 1496 - -
Lja5g2536 2216 MobiDBLite consensus disorder prediction 108 302 - -
Lja5g2536 2216 MobiDBLite consensus disorder prediction 750 775 - -
Lja5g2536 2216 MobiDBLite consensus disorder prediction 1402 1436 - -
Lja5g2536 2216 PANTHER TRANSCRIPTIONAL ACTIVATOR DEMETER 126 311 IPR044811 GO:0019104|GO:0035514|GO:0080111
Lja5g2536 2216 PANTHER TRANSCRIPTIONAL ACTIVATOR DEMETER 510 2179 IPR044811 GO:0019104|GO:0035514|GO:0080111
Lja5g2536 2216 SMART endo3end 1627 1799 IPR003265 GO:0006284
Lja5g2536 2216 MobiDBLite consensus disorder prediction 1586 1620 - -
Lja5g2536 2216 SMART ccc3 1800 1820 IPR003651 GO:0051539
Lja5g2536 2216 MobiDBLite consensus disorder prediction 651 675 - -
Lja5g2536 2216 Coils Coil 1931 1951 - -
Lja5g2536 2216 MobiDBLite consensus disorder prediction 2157 2216 - -
Lja5g2536 2216 Pfam RRM in Demeter 2060 2160 IPR028925 -
Lja5g2536 2216 CDD ENDO3c 1647 1765 IPR003265 GO:0006284
Lja5g2536 2216 MobiDBLite consensus disorder prediction 2166 2188 - -
Lja5g2536 2216 MobiDBLite consensus disorder prediction 503 525 - -
Lja5g2536 2216 MobiDBLite consensus disorder prediction 1394 1436 - -
Lja5g2536 2216 Gene3D - 1729 1817 IPR023170 -
Lja5g2536 2216 MobiDBLite consensus disorder prediction 163 177 - -
Lja5g2536 2216 SUPERFAMILY DNA-glycosylase 1279 1822 IPR011257 GO:0003824|GO:0006281
Lja5g2536 2216 MobiDBLite consensus disorder prediction 108 145 - -
Lja5g2536 2216 MobiDBLite consensus disorder prediction 348 381 - -
Lja5g2536 2216 MobiDBLite consensus disorder prediction 1111 1132 - -
Lja5g2536 2216 MobiDBLite consensus disorder prediction 1151 1177 - -
Lja5g2536 2216 Pfam Permuted single zf-CXXC unit 2025 2057 IPR028924 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g2536 Lja-Chr5 49893073 49905042 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g2536 - - lja:Lj5g3v0709830.1 2612.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g2536 5 49893073 49905042 Lja5g2536 5 49893073 49905042 ECH
Lja1g0743 1 7201589 7212175 Lja5g2536 5 49893073 49905042 PCT