Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g0743 ATGGAGGCTGGAGAAACGCAGGGGAAGAGGACTGAATTTCAGGTTCCTTGGATCCCAGCCACACCTTCAAAGCCCATTCATCCAAAATCAGCTCCGATCTGCACTTCTGGTGAGGGGGAGGGGAATGGGAACGGCGGCGGCTCGTACCCTCATTTCAATGGGTTTTTTGCAGGTTCTGACCCTGCTGGAGACAATGCTCTTCACCGCCGGTCAGCTCCACCTGCAGCTCCGGCCGCCAACATTCCCGATCACAATGCCCAGAGTCAAGTGCCCATACCGTTTGACAACAATTCCAGCTCAGGATTTGGGATATTTGCTGGTTTTAACCCCGCCGGAGTGGATGGCCCTCACCGCCGGTCAGCGCCACCTGAAGCTCCGGCCACCAACATTGCCACTCACAATGCCCAGAGTCAAAGACACATACCGTTGGACATCAATTCCAGCTCAGGATTTGGGTCATTTGCAGGTTCTGAGCCCGCCGGAGCCGATGGTCCTAACCACCGGTCAGCACCACCTGCTGCTCCGGCGACCAACATTGCCGATTACAATGCCCAGACTCGCGTACCAGTCTCGTTTGACAACAGTTCCAGCTTAGGATTTGGGTTATTTGCAGGTTTTGAGCCCACCGGAGCCAATGGTCCTAACCGCAGGTCAGCACCACCTGCAGCTCCGGCCACCAACATTGCCGATCACAATGCCCAGAGCCGAGCACCCGTACCGTTTGACATCAATTCCTCAGGATTTAGTTTTGCTGAGTTTCTGGCCCAGGCAAATGCTCCGCCGCCGGCGGCATATTCCAATGCAACACAAGGTGGATTTTTTGTGAACCAATTTATGCCTACTTGGAATTGGAACTCTCAGTTGAACCAGGGATATACACCAATTGGCCAGCGTCATTTCCCTCAGGAGCTACCATTGATCAACACCATCCATGGCAATTACCAGGATCCTCAAGGTACACCATACTTTTTGTATAACACCAGTTCTCAGGTTGCCCCACCTGCTCCAAATATGGCCATCACTGCAGAAAGCAGCCAAGTTGCGGCCACACAGTTGAGTATGGCGACAGGATTGAGTTTGGAAGTAAGGGACCAGGGGGGAGAGACAAACGTCCCAGCAACAGACTGCAACAATCAACACAACAAACTCTATGACCCTGATCAGAATAAGGAAATAGGCCAAGGTATTGATCTGAATAGAACACCTCAACCAAAGCCAAAAAGAAAAAAGCATCGCCCGAAGGTCGTCAGAGAAGCCAAACCCAAAAGTACTAAGACGCCAGCCACCCCAAAGCCTGAAAAGAGGAAGAATGCAGGCAAAGGATTGAAATTGGATTCCCCTCAAACTGAAGTGGCAGGGGAAGGGGATAAACTAATTCCAGAACCTGTCAAAAAGACATGTAGGAGGCCCTTAAACTTTGACTTGGTTGAGCAACCAATGGATGGAAATTCTGCAAGAAGAGAAAATGCAACTACACATTGGAACAGAGAAATTGGTGTTCAGGTCAAGGAAACACAGGTTTTAAATAGCTACATGTCATTACAAGAAGATTCACAAACCCCAAGTGCCGATCTTTCAAACGGCAATTCACTTGGGTCCAAGCCAAATGCCAACTATGTAGAGAATGGCAACAAAAGGGGTTGGCTGATTGGTCAGGATGGACATGACAAATTACTATCAGCAGCAGCAGCACAATCAAAACAACATGACTCCAACAACAGTTACAGTCAACTTTTGGCCACAAGATTGCAAGTAGTTGGTTCCAAGAGAAAACAATCTGGTGCCATTGAACATACAGATAACAGCAGCATCAATCTGATTGGGACACAATACAATTCTTTGCAGGGATACCTCCCAAAGTATTTGGTTGAATTTCCAAATGTTCAGAAGAAAAGGAGAAGTGAAAAGGGGAAAATTCCCAACACATTTTCCATGACTGCCACAGCAAATGTACAACCAGCACCTTGCCCACAAGAAGATGCTAGATCATTTACTCATGTATCAAGTTCTAGCTGCTGGACTTATGGTTCTGAATATAACCCAGTTATAGTCCCAGACATGTCTACAGCAACAGAGAGAGCTATTCATGATAAACCTCAGTCATTTGAGTGCAACTTGTCTTTAGAGAAGAGGCCAACCAAAAGAAGATCAAGAGTTCCTGCTAGAATTAATGATTTCTCTTCACTGACCTTCGTCAGAAACTGGGATTCCAAACTCACTCGTACTGTGAAAGAAGGCAGTTCTGATAGACAGACATTTGAGGATGCAGAAAGACCACAAACATGCATGGATGCTTTAGTTGCACAGATGAGTGCGTTGCTCACCAAAAAGAAACGGAGTAAAAAGAGAAGTTCAGCAGATCCTGGCACAAGTGAGATGCAGCAGCACCATACATTTGCAGCAAAAAATCACAGCTGGGCCTTTCAGAACTCATTAGATGTTGCATGTGAAGGGAGAAGGAAAAACATTCATAACGGGGGCACATTAACAGGGCGGTCTGGAGACCAAAACTTATACAGAGAAGATAGAGCGATGGTGGTGTATGGGCAGAAAGCAGTTGTCCCTTATAAACAGCAAAATAGAAACTACAAAACCCAAGGCACCATGGTTCCCTATAGTCCCTTAAAAAAACAGCGACCTAAAGTTGACCTTGATGAGGAGACTAACAAAGTGTGGAAGCTCCTAATGTTGGATATAAACAGTCATGGTGTTGATGGAACTGATGAGGAAAAGGAAAAATGGTGGGAAGAAGAACGAAATGTGTTCCGTGGACGTGCAGACTCATTCATTGCACGCATGCATCTAGTACAAGGAGATAGACGCTTCTCACAATGGAAGGGATCAGTAGTGGATTCAGTGGTTGGAGTTTTCCTCACTCAAAATGTCTCAGACCATCTTTCCAGTTCTGCATTCATGTCACTTGCTGCTCGGTTTCCCCTAAAGCCAAGCAGCAACTGCGAAACACACGACAAGGAAAATACAAGCTTGATTGTCAACGAACCACAAGTGGACATGGTAGAAGCAGAAGAAAATGGAAAATTGAAGGAAAAAATATTGAATCTATCTGCTTGTGAGTTGAGTTCTATGACAGTCGACGTCTTTGAGCATTCTGACGAAAGAGAAGTAGCTGATAGCAATGATTCGTGCAGAAACAGTAGCTCAATTACCTTAACAGATGAATCAAACTGCAAACTGTTGGAATCAGCACAAAGACATACCAGGGAACATAGTCCAATGGAGAGTGTTTGTCCCATGACTGGGGAAGTGCAAGAAAATTCATGTAATGGGGGTGTTAGGAGAGAGTTTAATGATTTATTTTCATCCCAAGGCTCTTTCATTACATCTCAAATATCTGGAGATTTTTCAATTGATCAAAATCCTGAGAAGATATCTTCAGATTGCAACTCAGAAGTAGAAGACTTGTCAAGTACAGCCAAATACAACATTTATCATAACAGGACTTCTTTCAGTAAGCTTCTTGAAATGGCAGGTTCAACCATGTTACATGAAGTCAACAGTCAAAGAAGCAAATCAACTGAGAGCTCAAGGGATGCATATGGACAATCTGTAGCTATGAATCATGACAACCTGGCAGAAAACTTGGAAAAGACCAATTTTACTCAAGACTTCTTAGAAGCATCAACCATCTCAAGCAATGAATACACTTTAAAAGTGACCCCAGATTCCGGGGTACTTGATATTAACTGCCCCAATCCTCTTCAAATTGAAGCCTCATCAAGTGGCTCCTCAAAGAATACTGATGAAATCAACACGAGATTTAGTTTTCCCATTACAGAATCAGAAAGCCAAGCTGCAGTTGCCCACTCTCAAAGTATCCTATCTCAACTCCATCTTCAGCCACAAAGTGACAACAATAAGGTAGATTCTGTCCCGGTAACAACATTAAGGGGCAAGCAGCGCAAAAAAGAGAAAAAGGATAATTTTGATTGGGATAGCTTGAGAATAACAGCACAAGCTACGGCAGGTAAACGAGAAAAAACGGAAAACACAATGGACTCCTTAGACTGGGACGCTGTGAGATGTGCTGATGTCAAAGAAATTGCTGATGCAATAAAAGAAAGAGGCATGAACAACATGCTAGCTGAACGTATTAAGAATTTCTTGAATCTATTGGTTGATGTACATGGAGCCATTGATCTCGAGTGGCTGAGAGATGTCCCACCTGACCAAGCAAAAGAATTCTTACTCAGCATAAAGGGATTGGGGTTGAAAAGTGTGGAGTGTGTGCGACTCTTAACACTACACCAACTTGCTTTCCCGGTGGACACAAATGTTGGGCGTATAGCGGTTCGATTGGGATGGGTGCCTCTCCAGCCACTGCCTGAGTCACTTCAGTTGCATCTTCTAGAATTGTACCCAGTGTTGGAGTCCATACAGAAATATCTCTGGCCCCGGCTGTGCAAGCTAGACCAAAAAACATTGTACGAACTGCATTACCAGCTGATTACGTTTGGAAAGGTCTTCTGCACAAAAAGCAACCCAAATTGCAATTCATGCCCAATGAGAGGGGAATGTAGACACTTCGCAAGTGCTTTTGCAAGCGCAAGGCTTGCCCTGACAGGACCAGAGCAGAAGAGTATAGTTGTCACAACTGGAAACAATGCAGCTTATCAGAACCCATCACCAACCATTCAGCAATTGCCCTTGGCTCTCCCTGAAAACACAAACCAACCAGAAGATCTTCAACAAACAGAAGTCACGGGACAACTTGCAGCAAAGTCTGAAAACTATACTTGCCAACCTATTATTGAAGAGCCAGCAACTCCAGAGCCAGAAGATTCCCATGTATCTGACATAGAGGATGCCTTTTATGAGGAGTCGGATGAAATTCCCACCATCAAACTGAACATGGAAGAATTTGCATCGAATTTAGAAAATCTTATGCAAAATAAAATGGAACTTCAAGAAGGTGAAATTTCCAAGGCCTTGGTTGCTCTACATCCAGAAGCGACGTTCATTCCTACACCCAAGCTGAAGAATGTGAGCCGGTTGCGAACAGAGCATTCTGTTTATGAACTCCCAGACTCACATCCACTTTTGGAAGGGTGGGAGAAGCGAGAACCTGACGATCCAGGCAAATACCTTCTGGCTATATGGACTCCAGGTGAGACAGCAAATTCTATAGAGCAACCAGAAAGAAAATGCATCGCTCAGGACTTTGCCCAGCTCTGTGATGATAGGCAATGTTTTTCATGCAATAGCTTCCGTGAAGCAGATTCACAGATAGTTCGAGGGACAATCTTGATACCATGCCGGACAGCTATGAGAGGGAGCTTTCCGCTAAATGGCACCTATTTTCAAGTCAATGAGGTTTTCGCAGACCATGACTCGAGTCATGAACCTCTTAGCGTTCCGAGAGAATGGATCTGGAACCTCCCTAGGCGAACTGTATATTTTGGAACCTCCGTACCATCCATATTTAAAGGTCTAACAACACCAGAAATTCAACAATGCTTTTGGAGAGGGTTTGTCTGTGTGCGGGCATTTGAGAGGGGAACGCGAGCACCCCGTCCTTTGAAGGGAAGACTACATTTCCCGGTTAGCAAGATGCCCAAGAACAAGGACAAGACCAAGAATGAGTCCGCGTCGGCAAACGCACAAGGACTGGAGTCAAATCCAGAACAGCCAGCAAACTTGCAAGGAGTGAATCCAAATCCAGAACAGCCGGAATTGCTTTCCAACATTCCCCATCTTCAGGGGAATGGTGGAGTTTGA 5736 0.4519 MEAGETQGKRTEFQVPWIPATPSKPIHPKSAPICTSGEGEGNGNGGGSYPHFNGFFAGSDPAGDNALHRRSAPPAAPAANIPDHNAQSQVPIPFDNNSSSGFGIFAGFNPAGVDGPHRRSAPPEAPATNIATHNAQSQRHIPLDINSSSGFGSFAGSEPAGADGPNHRSAPPAAPATNIADYNAQTRVPVSFDNSSSLGFGLFAGFEPTGANGPNRRSAPPAAPATNIADHNAQSRAPVPFDINSSGFSFAEFLAQANAPPPAAYSNATQGGFFVNQFMPTWNWNSQLNQGYTPIGQRHFPQELPLINTIHGNYQDPQGTPYFLYNTSSQVAPPAPNMAITAESSQVAATQLSMATGLSLEVRDQGGETNVPATDCNNQHNKLYDPDQNKEIGQGIDLNRTPQPKPKRKKHRPKVVREAKPKSTKTPATPKPEKRKNAGKGLKLDSPQTEVAGEGDKLIPEPVKKTCRRPLNFDLVEQPMDGNSARRENATTHWNREIGVQVKETQVLNSYMSLQEDSQTPSADLSNGNSLGSKPNANYVENGNKRGWLIGQDGHDKLLSAAAAQSKQHDSNNSYSQLLATRLQVVGSKRKQSGAIEHTDNSSINLIGTQYNSLQGYLPKYLVEFPNVQKKRRSEKGKIPNTFSMTATANVQPAPCPQEDARSFTHVSSSSCWTYGSEYNPVIVPDMSTATERAIHDKPQSFECNLSLEKRPTKRRSRVPARINDFSSLTFVRNWDSKLTRTVKEGSSDRQTFEDAERPQTCMDALVAQMSALLTKKKRSKKRSSADPGTSEMQQHHTFAAKNHSWAFQNSLDVACEGRRKNIHNGGTLTGRSGDQNLYREDRAMVVYGQKAVVPYKQQNRNYKTQGTMVPYSPLKKQRPKVDLDEETNKVWKLLMLDINSHGVDGTDEEKEKWWEEERNVFRGRADSFIARMHLVQGDRRFSQWKGSVVDSVVGVFLTQNVSDHLSSSAFMSLAARFPLKPSSNCETHDKENTSLIVNEPQVDMVEAEENGKLKEKILNLSACELSSMTVDVFEHSDEREVADSNDSCRNSSSITLTDESNCKLLESAQRHTREHSPMESVCPMTGEVQENSCNGGVRREFNDLFSSQGSFITSQISGDFSIDQNPEKISSDCNSEVEDLSSTAKYNIYHNRTSFSKLLEMAGSTMLHEVNSQRSKSTESSRDAYGQSVAMNHDNLAENLEKTNFTQDFLEASTISSNEYTLKVTPDSGVLDINCPNPLQIEASSSGSSKNTDEINTRFSFPITESESQAAVAHSQSILSQLHLQPQSDNNKVDSVPVTTLRGKQRKKEKKDNFDWDSLRITAQATAGKREKTENTMDSLDWDAVRCADVKEIADAIKERGMNNMLAERIKNFLNLLVDVHGAIDLEWLRDVPPDQAKEFLLSIKGLGLKSVECVRLLTLHQLAFPVDTNVGRIAVRLGWVPLQPLPESLQLHLLELYPVLESIQKYLWPRLCKLDQKTLYELHYQLITFGKVFCTKSNPNCNSCPMRGECRHFASAFASARLALTGPEQKSIVVTTGNNAAYQNPSPTIQQLPLALPENTNQPEDLQQTEVTGQLAAKSENYTCQPIIEEPATPEPEDSHVSDIEDAFYEESDEIPTIKLNMEEFASNLENLMQNKMELQEGEISKALVALHPEATFIPTPKLKNVSRLRTEHSVYELPDSHPLLEGWEKREPDDPGKYLLAIWTPGETANSIEQPERKCIAQDFAQLCDDRQCFSCNSFREADSQIVRGTILIPCRTAMRGSFPLNGTYFQVNEVFADHDSSHEPLSVPREWIWNLPRRTVYFGTSVPSIFKGLTTPEIQQCFWRGFVCVRAFERGTRAPRPLKGRLHFPVSKMPKNKDKTKNESASANAQGLESNPEQPANLQGVNPNPEQPELLSNIPHLQGNGGV* 1912
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g0743 1911 Gene3D Hypothetical protein; domain 2 1321 1423 - -
Lja1g0743 1911 MobiDBLite consensus disorder prediction 365 454 - -
Lja1g0743 1911 SMART endo3end 1322 1494 IPR003265 GO:0006284
Lja1g0743 1911 MobiDBLite consensus disorder prediction 427 441 - -
Lja1g0743 1911 MobiDBLite consensus disorder prediction 148 174 - -
Lja1g0743 1911 CDD ENDO3c 1342 1460 IPR003265 GO:0006284
Lja1g0743 1911 MobiDBLite consensus disorder prediction 1847 1911 - -
Lja1g0743 1911 Pfam RRM in Demeter 1752 1852 IPR028925 -
Lja1g0743 1911 MobiDBLite consensus disorder prediction 1 28 - -
Lja1g0743 1911 SUPERFAMILY DNA-glycosylase 924 1517 IPR011257 GO:0003824|GO:0006281
Lja1g0743 1911 Gene3D - 1424 1512 IPR023170 -
Lja1g0743 1911 SMART ccc3 1495 1515 IPR003651 GO:0051539
Lja1g0743 1911 Pfam Permuted single zf-CXXC unit 1718 1749 IPR028924 -
Lja1g0743 1911 PANTHER TRANSCRIPTIONAL ACTIVATOR DEMETER 355 1868 IPR044811 GO:0019104|GO:0035514|GO:0080111
Lja1g0743 1911 Coils Coil 1624 1644 - -
Lja1g0743 1911 MobiDBLite consensus disorder prediction 1867 1902 - -
Lja1g0743 1911 MobiDBLite consensus disorder prediction 60 87 - -
Lja1g0743 1911 MobiDBLite consensus disorder prediction 404 418 - -
Lja1g0743 1911 MobiDBLite consensus disorder prediction 515 536 - -
Lja1g0743 1911 MobiDBLite consensus disorder prediction 211 231 - -
Lja1g0743 1911 MobiDBLite consensus disorder prediction 776 796 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g0743 Lja-Chr1 7201589 7212175 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g0743 - - lja:Lj1g3v4695520.1 2715.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g0743 1 7201589 7212175 Lja1g0743 1 7201589 7212175 ECH
Lja1g0743 1 7201589 7212175 Lja5g2536 5 49893073 49905042 PCT