Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g2494 ATGGCTAGGGTGTTGTCAGATCCTCTAAAAGTTGGGACGGTGATTGGAGATGTTCTTGATCCTTTCATCCCAACCATAAAAATGTCTGTATTTTACAATAAGAAAGAAATCTTCAACGGATATGAGCTCTTCCCTTCCACAGTGACCACCAGGCCCAGGATTGAGATTGGAGGTGACATGAGGTCCCTCTTTACACTGATCATGATAGACCCAGATGTTCCTGGCCCTAGTGATCCTTATCTTAGAGAGCACTTGCACTGGATGGTGACTGACATTCCAGGCTCAACAGATGCCACATTTGGAAAGGAGTTGACAAGCTATGAGATCCCAATGCCTATTATAGGGATCCACAGGTATGTGTTTGTCCTTTTCAAGCAAAATCGCAAGAACAAGGGTGTTGTTAGTGTTACCCCACCATCAGCTTCAACTTCAAGTAGGGATCACTTCAACACTCGCGATTTCTCTGCTGAGAATGATCTTGGCCTCCCTGTTGCTGCTGTCTACTTCAATGCACGGAAGGAAACTGCTCCAAAGAGGCGCTAG 543 0.4567 MARVLSDPLKVGTVIGDVLDPFIPTIKMSVFYNKKEIFNGYELFPSTVTTRPRIEIGGDMRSLFTLIMIDPDVPGPSDPYLREHLHWMVTDIPGSTDATFGKELTSYEIPMPIIGIHRYVFVLFKQNRKNKGVVSVTPPSASTSSRDHFNTRDFSAENDLGLPVAAVYFNARKETAPKRR* 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g2494 180 Pfam Phosphatidylethanolamine-binding protein 49 169 IPR008914 -
Lja5g2494 180 SUPERFAMILY PEBP-like 13 173 IPR036610 -
Lja5g2494 180 CDD PEBP_euk 27 171 IPR035810 -
Lja5g2494 180 PANTHER PROTEIN TERMINAL FLOWER 1 5 178 IPR031114 GO:0003712|GO:0009910
Lja5g2494 180 PANTHER PHOSPHATIDYLETHANOLAMINE-BINDING PROTEIN 5 178 IPR035810 -
Lja5g2494 180 Gene3D - 1 180 IPR036610 -
Lja5g2494 180 ProSitePatterns Phosphatidylethanolamine-binding protein family signature. 64 86 IPR001858 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g2494 Lja-Chr5 49019027 49021072 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g2494 K06910 - gmx:100787529 266.544
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g2494 5 49019027 49021072 Lja5g2494 5 49019027 49021072 ECH
Lja1g0710 1 6815179 6816908 Lja5g2494 5 49019027 49021072 PCT