Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g0710 ATGTCAAAAATAATGTCCACAGATCCTCTAGTTGTTGGAAGAGTGGTAGGAGATGTACTTGATAGTTTCACCACTAGCATGAAATTGACTGTGAGTTTCAATAACAAGCAAGTGTTCAATGGCCATGAGTTCTTCCCTTCCACTATTAACACCAAGCCCAAGGTTGATATTGGTGGTGGTGACATGAGGTCCTTCTTTACAGTGATCATGACAGACCCAGATGTTCCTGGACCTAGTGATCCTTATCTCAAAGAGCACCTGCACTGGATGGTGACTGATATTCCCGGAACAACAGATGCCACATTTGGAAAAGAGTTGGTGAGCTATGAGATTCCAAAGCCTAACATTGGGATCCATAGGTTTGTGTTTGTCCTGTTCAAGCAAAAACGTAGGCAATGTGTGAGTCCACCATCTTCAAGGGATCACTTCAACACTCGCAGTTTTGCAGCACAGAATGACCTTGCTCTCCCTGTTGCTGCTGTCTACTTCAATGCTCAGAGGGAAACTGCTGCAAGAAGACGCTAG 525 0.4457 MSKIMSTDPLVVGRVVGDVLDSFTTSMKLTVSFNNKQVFNGHEFFPSTINTKPKVDIGGGDMRSFFTVIMTDPDVPGPSDPYLKEHLHWMVTDIPGTTDATFGKELVSYEIPKPNIGIHRFVFVLFKQKRRQCVSPPSSRDHFNTRSFAAQNDLALPVAAVYFNAQRETAARRR* 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g0710 174 Pfam Phosphatidylethanolamine-binding protein 50 163 IPR008914 -
Lja1g0710 174 SUPERFAMILY PEBP-like 14 168 IPR036610 -
Lja1g0710 174 ProSitePatterns Phosphatidylethanolamine-binding protein family signature. 66 88 IPR001858 -
Lja1g0710 174 PANTHER PHOSPHATIDYLETHANOLAMINE-BINDING PROTEIN 4 173 IPR035810 -
Lja1g0710 174 CDD PEBP_euk 27 165 IPR035810 -
Lja1g0710 174 PANTHER PROTEIN TERMINAL FLOWER 1 4 173 IPR031114 GO:0003712|GO:0009910
Lja1g0710 174 Gene3D - 2 174 IPR036610 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g0710 Lja-Chr1 6815179 6816908 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g0710 K06910 - gmx:100791809 308.916
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g0710 1 6815179 6816908 Lja1g0710 1 6815179 6816908 ECH
Lja1g0710 1 6815179 6816908 Lja5g2494 5 49019027 49021072 PCT