Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g2328 ATGGCAATTTCTTTACCAAAATTCCATCCCTCTTCCCTAATCTACCAGCACCCCTTCATTTTCATCATAACAATTTCTTTCCTCTGCAACTTCACCACTGCAGAAACCCACTCTTTTGGGCGAATCATTTCACCCTCAACGCTGGGGCTCAACAAACCGCAGAAACTGAGCCACCTGCGCTTCTACTTCCACGACATCGTCGACGGGCCAAACCAATCGGCTTTCCGCGTCGCTGCTGCTCCGTCCACCAACAACTCCCCGACGGGGTTCGGCGCGGTGGTGGTGATGGATGACGCGCTGACTGAGCTGCCGGAGATGGGTTCCAAGGTGGTGGGGAGGGCGCAGGGGATGTACGCACTGGCTTCGCGGAGTGAAGTGGGTCTCCTGATGGTGCTCAACTTTGCATTCACGGAAGGGAAGTATAACGGGAGCAATCTCAGCGTGCTTGGGCGGAACGCGGCGAATTCCGCCGTGAGGGAGATGCCGGTGGTGGGTGGCAGTGGGTTGTTCCGGTTCGCTAATGGGTATGCTCAGGCAAGGACACATCATTCCACAACAGTGGAAGATGTTGTGGAGTACAACGTCTTTGTCTTCCATTATTGA 603 0.5473 MAISLPKFHPSSLIYQHPFIFIITISFLCNFTTAETHSFGRIISPSTLGLNKPQKLSHLRFYFHDIVDGPNQSAFRVAAAPSTNNSPTGFGAVVVMDDALTELPEMGSKVVGRAQGMYALASRSEVGLLMVLNFAFTEGKYNGSNLSVLGRNAANSAVREMPVVGGSGLFRFANGYAQARTHHSTTVEDVVEYNVFVFHY* 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g2328 200 PANTHER NUCLEOPORIN-RELATED 19 199 IPR004265 -
Lja5g2328 200 ProSitePatterns Serpins signature. 13 23 IPR023795 -
Lja5g2328 200 Pfam Dirigent-like protein 57 198 IPR004265 -
Lja5g2328 200 Gene3D - 43 195 IPR044859 -
Lja5g2328 200 PANTHER DIRIGENT PROTEIN 19 199 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g2328 Lja-Chr5 42324674 42325711 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g2328 - - lja:Lj5g3v0746880.1 401.749
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g2328 5 42324674 42325711 Lja5g2328 5 42324674 42325711 ECH
Lja1g1192 1 12269331 12270161 Lja5g2328 5 42324674 42325711 PCT