Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g1192 ATGGCCAAATCCAAAACCCTGATCTTGTCCCTTTTCATCATTTCCCTAACCCTCCTTCTCTCCTCAGCCATCGCAGCCAAACAACCTCGTTTCTCCCGAATGATCACCCCAACCTCTCTAGGCCTCAAAAAGGAAAAGCTCAGCCACCTCCACTTCTACTTCCACGACATTCTCAGCGGCCCGAAGCCCACCGCGGTGACGGTCGCCACGGCCCAGATGACCAACACCTCCTCCACGTTCTTTGGGATGGTCAACATGGCCGACGACCCGCTGACGGTGGGCCCTGAGCCGGAGTCCAAGCTCTTAGGAAAGGCGCAGGGGATCTACGGGGCCGCTGCGCAGCAAGAGGTTGGGCTACTGATGGTCATGAACTTCGCATTCTCGGAAGGGAAGTACAACGGCAGCACGCTCAGCATGTTGGGGCGGAACACGCCGCTCTCCGCCGTGAGGGAGATGCCGATTGTCGGAGGGAGCGGACTTTTCCGGTTTGCGCGTGGGTATGCTCTGGCTAATACTCACACTTTTGATCTCAAGACAGGGAATGCTGTTGTGGAGTATAATGTTTACGTGTTCCATTATTAA 582 0.5567 MAKSKTLILSLFIISLTLLLSSAIAAKQPRFSRMITPTSLGLKKEKLSHLHFYFHDILSGPKPTAVTVATAQMTNTSSTFFGMVNMADDPLTVGPEPESKLLGKAQGIYGAAAQQEVGLLMVMNFAFSEGKYNGSTLSMLGRNTPLSAVREMPIVGGSGLFRFARGYALANTHTFDLKTGNAVVEYNVYVFHY* 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g1192 193 Gene3D - 36 189 IPR044859 -
Lja1g1192 193 PANTHER NUCLEOPORIN-RELATED 10 192 IPR004265 -
Lja1g1192 193 Pfam Dirigent-like protein 48 191 IPR004265 -
Lja1g1192 193 PANTHER DIRIGENT PROTEIN 10 192 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g1192 Lja-Chr1 12269331 12270161 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g1192 - - gmx:100789492 275.018
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g1192 1 12269331 12270161 Lja1g1192 1 12269331 12270161 ECH
Lja1g1192 1 12269331 12270161 Lja5g2328 5 42324674 42325711 PCT