Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g2320 ATGCCAGGATTAACAACCGGGAATGATCAATTCAGTGATGAGCAATCAAAACCTGCTCTCTCCGCCAATGGATTCTGGTCTAAGAACCTTGGCGACATTAGCCACAATCAGCTCCAGAAGTTCTGGAGTGGGCTATCACCACAAGCTCGGCAAGAACTCTTGAGGATAGACAAACAAGCGCTCTTTGAGCAAGTGCGAAAAAATATGTACTGCTCCAGGTGCAATGGGCTTCTTCTTGAAGGCTTTATGCAGATTGTTTTCAGACCTGGTGGTTTCAAAAATCAAAATAGCATTAAATCATCCACTTTGAATGGGGTCCAGGATGAAACTCAAGATCCATCGTTCCATCCTTGGGGAGGTTTGACCACAACGCGTGAGGGTTTGCTAACACTTATGGATTGCTACTTGTACTCAAAGTCTCTGAAAGGACTGCAAATTGTATTTGATGGGGCACGTGCAAGAGAGCGGGAAAGAGAACTGCTTTATCCTGATGCCTGTGGTGGGGGAGGCCATGGTTTTTGGATAAGCCAAGCAATAGTGAATTATGGCAGAGGGCATGGGACAAGGGAAACCTGTGCTCTGCATACTGCTAGACTTTCATGTGATACGCTGGTTGATTTTTGGTCAGCACTGGGCGAGGAGACAAGGCAATATCTTCTAAGGATGAAGGAAGAAGATTTTATAGAGAGACTCATGTACAGGTTTGATAGCAAGAGGTTTTGCAGAGATTGTAGAAGAAATGTTATTCATGAATTCAAGGAACTAAAAGAACTCAAGCGCATGCGCAGAGAACCAATGTTGTCAGACTCGCGAATGTTCTTGGAATTGGCAAAAACGTTCGTTGCAACTATTGTCACGTCAATTTTTGGGGAGGAATTAATAGATTCAAGACAAACCTTGCTTGTTTTGGAGGATATGATGGACGATGTATTAGTTATGTACTTTGTTTTGGTGCTTGAGGAACGAGTTCATGTAGCATGCAAGAAAATCATTACATTAGAAAAGCAGAAGAAGAAAAGGAAAAGCGTGAAGAAGAAGAACACAAGGAGAGGAAAAGGACGAAAGAAAGGAAAAAAAAAACTTCGGAGGAAAGAAAGATTCAAAGGAAAGGAGAAAAATATAGAAAGCAAGTGTTCTGAATCAATTGATTGTCCTGACTCTCCGGAAGTCTCAAAGGAAGAATTGTCTGCACCTGCTGATATGGAGCAAAATAATTCTATTAGAAGCAGGAATTCAGTTATTATCACGGATGAGGCTAAATTATCTCAGGGAAACCATCTTAACATCCAAGATGACGACTTCTCTAATGAGTGTAGCACTTTGAAAACACAAGACCACTCTTGTGATGACTATAATGGAGACTTTGCAACTGCACATGATAGGAATGGTACGTCTAGAGTTGAACAACCTAAGTGGTCTGACATGCGCCTTAATGCGGGTCTTTCAGAAAATGGTGTGATGGTTGCAAGATATCAGCCAAGAGACTATGGAGATAATTTTGGGACATCTTCGAGGGGAATCAATGGATTGAACAGACAATCAAAAATAAATGTTCCAAAAGCCAATGGTCGGGGTGTTGGTCATATGTGTAATGAGAAGCTCTGTAGTTCCAATTTCCAGATGAGTGACAGATATGATTTCCGTTCTTGCAATTGTAGCATGAGTAATAGAATGACCAAATTTAGGGAGACAAAAGCCGCAAATAAGTTTGAATATGCTATCGATACATCTAAGCAGTTTTATCATGGAAGTAAGTATAATCAGGTAGACTTATTGCATGAGAGTAATGGAAGACCCAAAAGTAAAGTCATCTCCGAGAACTATCCCAGCAGGGATTTGCTTCAATCAAAGAAAGTTTGGGAGCCTGTGGAATCACACATTAAGTATGCTCACAGTCGTTCGGACCCTAATGTTACCTTGAGGTCCACAGGTCTATCACATGTTGAAGTTGGTGATTCAAGTCAAATTCATGGTGATGATAATGATTCGAAGAGAGGTGGAATGGGTGAAGGTAGTCAGAATGATCTTGATACAGAAGCTGAAGGATCTTGCAGCTCCACAGAAATTGCATCTAAGGAACCTAGAATATACGTGAAGAATGATTCTCCTTGGAATAATTCTTCTGATCACAGTCAAGGTATCACTTCTAGTTCTTATATCTCATCATGCTTAAGCGAGGGTGATAATAATATAACCTCTTCAAACCATGATAGCACGAAATCCTCAACATCAGATTCAGAATATGCTAGCCAAAAATCCGAAAGAGATAGTTCAACCTACATTGACTATGGCTTGTCTGGCTGTCATGAAGCTGAGCTAGAGAAAATCCATAATGAAAAGGGTGATGGCTTGGAAATGAGGTTACAATCTAGTTCATCTTTGGATGTAGCGGGGAGTGATGCATTGTGTAATCCTGTGGTGGAAATTGCCCAAAATTTGGAAAATGAGCTTTCCTCCACTAATTTGTGTTCTCAAAATCGAAACTTGCCTCCCCCAATTCCAAACCAAAACATACAATTTCTAGTGTTTCATACTCCTCCTGCAATGGGTTATTACCATCAAAATCCGGTTTCGTGGACAGCTGCTCCCACAAATGGGTTGATGCCCTTCCAACACCCAAATCACTATTTATACGCTGGCCCTCCTGGATATAGCTTAAATGAAGACCCACACTTCTGCTTGCAGTACAGTCCTTACAGCAACTCACACCGCTATTTAACCCTGTGGTATTCTTCATCCATGCAAGAGCCTTCTAACGGATCTATTGCAGAAAGGGTTGTTCCAGCTCCAGCTAAAGCAGCGTCGAATTGTGAAAATAGACTTGGTAATACTGCCAAGTTACAAGAGAGTAACGATGGTATTTCCTTGTTTCATTTTGGCGGGCCTGTAGCCCTTTCAACTAGTTACAAAACGGCCACTGTTTCTTCAAATGACGAAAATGCTCCAAACTTCAATCCAAATAATTCGTCAGATCATGTTGAAACAGATCATGGTTGCAATAGGAATGAGACTGTTGTCGTAGAGGAGTACAACTTGTTTGCTGCAAGTAATACCTTAAGGTTTTCGATTTTCTGA 3075 0.4114 MPGLTTGNDQFSDEQSKPALSANGFWSKNLGDISHNQLQKFWSGLSPQARQELLRIDKQALFEQVRKNMYCSRCNGLLLEGFMQIVFRPGGFKNQNSIKSSTLNGVQDETQDPSFHPWGGLTTTREGLLTLMDCYLYSKSLKGLQIVFDGARARERERELLYPDACGGGGHGFWISQAIVNYGRGHGTRETCALHTARLSCDTLVDFWSALGEETRQYLLRMKEEDFIERLMYRFDSKRFCRDCRRNVIHEFKELKELKRMRREPMLSDSRMFLELAKTFVATIVTSIFGEELIDSRQTLLVLEDMMDDVLVMYFVLVLEERVHVACKKIITLEKQKKKRKSVKKKNTRRGKGRKKGKKKLRRKERFKGKEKNIESKCSESIDCPDSPEVSKEELSAPADMEQNNSIRSRNSVIITDEAKLSQGNHLNIQDDDFSNECSTLKTQDHSCDDYNGDFATAHDRNGTSRVEQPKWSDMRLNAGLSENGVMVARYQPRDYGDNFGTSSRGINGLNRQSKINVPKANGRGVGHMCNEKLCSSNFQMSDRYDFRSCNCSMSNRMTKFRETKAANKFEYAIDTSKQFYHGSKYNQVDLLHESNGRPKSKVISENYPSRDLLQSKKVWEPVESHIKYAHSRSDPNVTLRSTGLSHVEVGDSSQIHGDDNDSKRGGMGEGSQNDLDTEAEGSCSSTEIASKEPRIYVKNDSPWNNSSDHSQGITSSSYISSCLSEGDNNITSSNHDSTKSSTSDSEYASQKSERDSSTYIDYGLSGCHEAELEKIHNEKGDGLEMRLQSSSSLDVAGSDALCNPVVEIAQNLENELSSTNLCSQNRNLPPPIPNQNIQFLVFHTPPAMGYYHQNPVSWTAAPTNGLMPFQHPNHYLYAGPPGYSLNEDPHFCLQYSPYSNSHRYLTLWYSSSMQEPSNGSIAERVVPAPAKAASNCENRLGNTAKLQESNDGISLFHFGGPVALSTSYKTATVSSNDENAPNFNPNNSSDHVETDHGCNRNETVVVEEYNLFAASNTLRFSIF* 1025
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g2320 1024 MobiDBLite consensus disorder prediction 676 690 - -
Lja5g2320 1024 MobiDBLite consensus disorder prediction 977 993 - -
Lja5g2320 1024 MobiDBLite consensus disorder prediction 647 712 - -
Lja5g2320 1024 PANTHER OS10G0105400 PROTEIN 911 1024 - -
Lja5g2320 1024 PANTHER OS10G0105400 PROTEIN 1 267 - -
Lja5g2320 1024 MobiDBLite consensus disorder prediction 728 756 - -
Lja5g2320 1024 PANTHER - 1 267 - -
Lja5g2320 1024 MobiDBLite consensus disorder prediction 337 367 - -
Lja5g2320 1024 MobiDBLite consensus disorder prediction 977 997 - -
Lja5g2320 1024 MobiDBLite consensus disorder prediction 337 406 - -
Lja5g2320 1024 PANTHER - 911 1024 - -
Lja5g2320 1024 PANTHER OS10G0105400 PROTEIN 275 898 - -
Lja5g2320 1024 PANTHER - 275 898 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g2320 Lja-Chr5 42084770 42100049 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g2320 - - gmx:100776127 709.138
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g2320 5 42084770 42100049 Lja5g2320 5 42084770 42100049 ECH
Lja1g1197 1 12336551 12346381 Lja5g2320 5 42084770 42100049 PCT