LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lja1g1197	ATGAAAATGCCTGGATTAGCCACATCACCGTCGTCCTGCTCACTTTCTGCCAATGGGTTTTGGGCTAAGAATTCTGACTATGTTAGCTACAATCAGCTTGAGAAGTTCTGGAGTGAGTTGCCACCGCAAGCTCGGCAAGAACTGTTGAGGATAGACAAGCAATCCCTTTTTGAGCAAGCTCGTAAAAATATGTACTGCTCCAGGTGCAATGGATTGCTTCTTGAAGGTTTTTTGCAGATTGTTATGTATGGGAAATCTTTGCAGCAGGAAGGGGTGGGTTCTCACTCTCCTTGCAACGCACCTGGAGGTTCTAAAAAACAAAACAATGGTGGATCTAGCATTATGAAAGGGTGTGAAGATGGAGTTCAAGATCCATCTGCCCATCCTTGGGGAGGTTTGACCATAGCCCGTGATGGTTCATTGACACTTGTAAACTGCTACTTGTTTTCTAAGTCTTTGAAAGGACTACAAATTGTATTTGACGGGGCACGTGCAAGGGAGCGAGAACGAGAACTACTTTATCCTGATGCTTGTGGTGGGGCAGGCCGTGGTTGGATAAGCCAAGGAATTGTGAGTTATGGCAGAGGACATGGGACAAGAGAATCTTGTGCCCTGCACACTGCCAGACTTTCATGTGATACATTGGTGGATTTTTGGTCAGCACTGGGAGAGGAGACCCGCCTATCTCTTCTAAGGATGAAGGAAGAAGATTTTATCGAGAGACTTATGTACAGGTTTGATAGCAAGAGATTTTGCAGAGATTGTAGAAGAAATGTTATTAGAGAATTCAAGGAACTAAAAGAACTGAAGCGCATGCGTAGAGAACCTCGTTGCAGCAGCTGGTTTTGTGTTGCTGACTCAGCCTTCCAGTACGAGGTATCTGATGACTCAATTCAAGCCGATTGGCGTCAGACATTTGCTGATACGTCGGGAGTTTACCATCACTTTGAGTGGGCTGTGGGGACATCTGAAGGAAAAGCTGACATTTTGGAATTTGAAAATGTTGGTTTGAATGGATGTGTTAAAGCCAGTGGCCTGGACCTTGGTGATTTGAATGCATGTTTCATCACCCTCCGAGCTTGGAGATTAGATGGACGCTGTAGTGAACTTTGTGTTAAAGCTCATTCATTGAAAGGTCAACAGTGTGTACATTGCAGATTAATTGTAGGAGATGGTTACGTCACAATCACAAAAGGGGAAAGTATCAGTAGATTCTTTGAGCATGCTGAAGAGGCAGAGGAGGAAGAGGATGATGATTCAGTTGACAAGGATGCAAATGAGATTGATGGAGAATGTACTCGTCCCCAAAAGCATGCAAAAAGCCCTGAACTTGCTCGTGAATTTCTGCTGGATGCTGCCACTGTTATTTTCAAAGAACAGGTTGAAAAGGCTTTTAGAGAAGGAACAGCTCGCCAAAATGCACACAGCATTTTTGTTTGTCTTGCACTGAAACTGCTGGAGGATCGGGTGCATGTAGCATGCAAAGAAATTATTACATTAGAAAAGCAGGTAAAACTTCTTGAAGAAGAAGAAAAGGAAAAACGTGAGGAAGAAGAACGCAAGGAACGGAGAAGGACAAAGGAAAGGGAGAAAAAGCTTCGGAAGAAGGAAAGACTAAAAGGAAAGGAAAAAGACAAAGAAAAAAGGTGTTCCGAATCAAATGATGTTCTTGATTCTTCTGAAATCTCGAAGGAGGAAATGTCTGCAATTGCTGATAAGGAGCAAAATAACCCTATTAGCTGCATAAATTCAGATGTTGAAACAGATGGAGCTAATAGACTGAGGGATGATTCTACTGACATCCATGAGAAAGAATCCTCTAGCGAGTATAATTCGTTGAACACACAACAACACTCTTCTGATGATTGTGATGAAGAATATGCCAATACAAAAGATGAGACAGATCAGTCTACAGTTGAAGAATCAATGCTTTCTCATAGAAAACCGAGATGCAGGAAAGAATATCAACTGGATATGCCTATGAAGTGGTCTGACAGACGCAGATATGCCATTGTTTCAGAAAATGGTGTGAATGTGGGCAGATCTGATCCAAGACACTTTGGAGAGAGTTTTGTGACATCATCCAGGGTAATCAACGGAGTGAACCGGCAATCTCGGGTAAATGTTCCAAATAAACCCAATGGTCGAAATGTTGGTCCCAAGTATAGTGAGAAGTTCTACAGTTCCAAGAACTGGATGAGTGACAAATCTGATATTCATTCTTGCAGTTGTAGTCTGAGTAATGATTATAGCATAAAGGTTGAGCAACATTCTCCCATGACTAGAGTTAGTCGAGAGACAAAACCTGCCAGTGAGTCTGATTCTACAGGAGATGCATCTAAGCAGTTTTATCGTGGTTCTAAGTATAATCAAGCAGACTATATACATGAAAGTAGTGGAAGATCCAAAAGCAAAATCATCACGGGGAACTATCCTGGCAGGGATTTATATCAACCAAAGAAAGTTTGGGAGCCTACGGATTCTCTAAAGAAATATCCCCGTAGTAATTCAGACTCTGATGTTTTGAAGTCCACTGAAGTCCAAGGTGCTCCGTCTGATCTGATCAAGTCATCTATTGGGGAAGCTGTTTATTCAGGTAAAAATGATTATGGGGATTGTAATTCCAAGCAATTAAGTGGAATGGATGAAGGCTGTCAAAATGATTTTCATGAGGAAGCTGAAGGTTCTTGTAGCTCTACAGAAATTACATCTGAGGAACATGGAATATCCTCAAGTGGAGGCCCTGCCTTGAATAATTCTTCTGATCCTGCTCCAAGTAGCAGTTGTAGTTCGGATAACTACTCATCATGTCTAAGTGAGGGTGATAATAATACAAACTCATCAAAGCGCGGAAATCCAGAATCCTCAACCACATCAGATTCAGAAGATGTTAGCCAACAATATGAAGTTAAAGATAATTCAGCTTGTGTGGAAAATGTCTTGTCTGATTGTCATAAAGTTGCTGTGGAGAATAACCAGAATGCAAATGGTGAAGGTTTGGCAAGAAGTTCAAGTTCATTGATTTCTCCATCCTTGGATGTTACAAGAAGTGATACATTGAGGAATGTTGTTGAAGTTGGCCAAAATTATGATAATGGTTTTTCCACCACTAATGTGTGTTCTCAACCTCAAAGCATGCTTCCACCGCTGTCAAACCAACATATTCAATTTCCAGTGTATCAAGCTCCTTCAACAATGGGCTATTTCCATCAACATCCAGTTTCATGGACAGCAGCTCCCCCAAATGGATTGATGTCCTTCCCGCACCCAAATCACTATTTATATGCTGGCCCTCTTGGATATGAGGACCCCCGCTTCTGCTTGCACTATGGTGCCTTACAGCAACCTGCGCCCTTATTTACCCCTGCTGTTCCAGTTTATCAGCCAGTTCCCAGAGCTAATGTCTTAAATGCAGAGGAATGGACTCGAGCATCCAAGATTCCTTCATTGCAACAGCATCATACTGGATCTATTGCAGAGAGTACTGTACCGGCCGGAACAAATGCCAAAATTCCAGCATTCAATGGAGAAGTTAAACGTGATAGTTCTGCCATGTCACAGGAGAACAACAGTGACTTTTCCTTGTTTCATTTTGGGGGGCCTGTAGCCCTTTCAACAGGTTGTAAATCGACTCTTGCATCTTCGAATGGTGGCACTATTGGCGATTTCAGGACAAAAAGTTCAGAAGATCATGTCGAAAGTGTCCATACTTGCAATAAGAAAGAGACTACCACCATGGAGGAATACAACTTGTTTGCAGCAAGTAATAACTTAAGGCTTTCATTTTCTGAAATGATAAAGTGA	3804	0.4206	MKMPGLATSPSSCSLSANGFWAKNSDYVSYNQLEKFWSELPPQARQELLRIDKQSLFEQARKNMYCSRCNGLLLEGFLQIVMYGKSLQQEGVGSHSPCNAPGGSKKQNNGGSSIMKGCEDGVQDPSAHPWGGLTIARDGSLTLVNCYLFSKSLKGLQIVFDGARARERERELLYPDACGGAGRGWISQGIVSYGRGHGTRESCALHTARLSCDTLVDFWSALGEETRLSLLRMKEEDFIERLMYRFDSKRFCRDCRRNVIREFKELKELKRMRREPRCSSWFCVADSAFQYEVSDDSIQADWRQTFADTSGVYHHFEWAVGTSEGKADILEFENVGLNGCVKASGLDLGDLNACFITLRAWRLDGRCSELCVKAHSLKGQQCVHCRLIVGDGYVTITKGESISRFFEHAEEAEEEEDDDSVDKDANEIDGECTRPQKHAKSPELAREFLLDAATVIFKEQVEKAFREGTARQNAHSIFVCLALKLLEDRVHVACKEIITLEKQVKLLEEEEKEKREEEERKERRRTKEREKKLRKKERLKGKEKDKEKRCSESNDVLDSSEISKEEMSAIADKEQNNPISCINSDVETDGANRLRDDSTDIHEKESSSEYNSLNTQQHSSDDCDEEYANTKDETDQSTVEESMLSHRKPRCRKEYQLDMPMKWSDRRRYAIVSENGVNVGRSDPRHFGESFVTSSRVINGVNRQSRVNVPNKPNGRNVGPKYSEKFYSSKNWMSDKSDIHSCSCSLSNDYSIKVEQHSPMTRVSRETKPASESDSTGDASKQFYRGSKYNQADYIHESSGRSKSKIITGNYPGRDLYQPKKVWEPTDSLKKYPRSNSDSDVLKSTEVQGAPSDLIKSSIGEAVYSGKNDYGDCNSKQLSGMDEGCQNDFHEEAEGSCSSTEITSEEHGISSSGGPALNNSSDPAPSSSCSSDNYSSCLSEGDNNTNSSKRGNPESSTTSDSEDVSQQYEVKDNSACVENVLSDCHKVAVENNQNANGEGLARSSSSLISPSLDVTRSDTLRNVVEVGQNYDNGFSTTNVCSQPQSMLPPLSNQHIQFPVYQAPSTMGYFHQHPVSWTAAPPNGLMSFPHPNHYLYAGPLGYEDPRFCLHYGALQQPAPLFTPAVPVYQPVPRANVLNAEEWTRASKIPSLQQHHTGSIAESTVPAGTNAKIPAFNGEVKRDSSAMSQENNSDFSLFHFGGPVALSTGCKSTLASSNGGTIGDFRTKSSEDHVESVHTCNKKETTTMEEYNLFAASNNLRLSFSEMIK*	1268

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lja1g1197	1267	MobiDBLite	consensus disorder prediction	409	439	-	-
	Lja1g1197	1267	MobiDBLite	consensus disorder prediction	619	647	-	-
	Lja1g1197	1267	Coils	Coil	483	549	-	-
	Lja1g1197	1267	MobiDBLite	consensus disorder prediction	94	114	-	-
	Lja1g1197	1267	MobiDBLite	consensus disorder prediction	573	587	-	-
	Lja1g1197	1267	PANTHER	-	12	1261	-	-
	Lja1g1197	1267	MobiDBLite	consensus disorder prediction	410	425	-	-
	Lja1g1197	1267	PANTHER	OS10G0105400 PROTEIN	12	1261	-	-
	Lja1g1197	1267	MobiDBLite	consensus disorder prediction	755	848	-	-
	Lja1g1197	1267	MobiDBLite	consensus disorder prediction	820	837	-	-
	Lja1g1197	1267	MobiDBLite	consensus disorder prediction	892	966	-	-
	Lja1g1197	1267	MobiDBLite	consensus disorder prediction	540	571	-	-
	Lja1g1197	1267	MobiDBLite	consensus disorder prediction	509	526	-	-
	Lja1g1197	1267	MobiDBLite	consensus disorder prediction	589	607	-	-
	Lja1g1197	1267	MobiDBLite	consensus disorder prediction	884	966	-	-
	Lja1g1197	1267	MobiDBLite	consensus disorder prediction	773	806	-	-
	Lja1g1197	1267	MobiDBLite	consensus disorder prediction	509	647	-	-
	Lja1g1197	1267	MobiDBLite	consensus disorder prediction	94	118	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lja1g1197	Lja-Chr1	12336551	12346381	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lja1g1197	-		-	gmx:100813046	1845.86

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Lja1g1197	1	12336551	12346381	Lja1g1197	1	12336551	12346381	ECH
	Lja1g1197	1	12336551	12346381	Lja5g2320	5	42084770	42100049	PCT