Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g2317 ATGGCGAAGTACGGCGAGGGCGACAAGCGGTGGATCGTGGAAGACAGACCCGACGGCACCAACGTCCACAACTGGCACTGGGCCGAAACCAACTGCCTCGAGTGGTCCAGAGCCTTCTTCAACAACCTCCTCACCAACCTCACCGTGCTCCACGGCGGCGCCGATGATAACAACCTCCACGCCACCATCAAGAAGGTCGAGAAGCTCGACGGCGAGGCGTATGTGAATATCCGCAAGGGGAAGGTTATTCCGGGATACGAGCTCAGCGTTTCGCTTTCCTGGGAAGGGGAGGTTAGGGATGCGGAGGGGAAGATCTTGAACAAAGTCAACGGCACGGTTGAGATCCCGTATATTTCTGATGAGAATGCTGATGAGGATCCTGAGGTTAGGGTTACGGTGAAAGATGAGGACCAGATCGGGAAGAGGTTGAAGGAGGCGATGGTTGCGAAGGGGAAGCCGGTGGTTTTGGATAAGGTTAGGGTTTGGTTGCAGAGTATGGCGAGAGGTGGGCCTGTTAAGGAGGAGCTTGAGGTGAAGAAGGTGGCCGCGGTGGCGCCGCAGAAGAGTGATGATAAAGCGGTGGAGGTGAAGAAGAAAGAGGAGGAGGTTGCGGCAGGGGTGGCGAAGAAGGAGGAGAAGAAGAAGAAGAAAGAAGGGTTTAAAACGATTAGTTTGACGGAGAGGTTTAATTGCAGGGCGAGGGATTTGTTTGAGATATTGATGGATGAGAATAGGTGGAAGGGTTTTACTCAGAGCAATGCGAGGATTAGCAAGGAGGTTAATGGAGAGTTTAGTATCTTCGATGGGTCGGTTACGGGGATGAATTTGGAGTTGCAGGAAGGGAAGTTGATTGTGCAGAGATGGAGGTTTGGGAGCTGGCCAGATGGGATGCAATCAACAGTGAGGATTGTGTTTGAGGAGCCTGAATCTGGGGTTACAGTTGTGAAGCTCACACATACTGATGTGCCTGAAGAAGATAGGTATGGGAATGCGACTGTGGTTGAGAACACGGAGAGGGGATGGCGGGATCTCATCTTCCAAAGGATAAGGGCTGTGTTTGGTTTTGGAATTTGA 1074 0.5214 MAKYGEGDKRWIVEDRPDGTNVHNWHWAETNCLEWSRAFFNNLLTNLTVLHGGADDNNLHATIKKVEKLDGEAYVNIRKGKVIPGYELSVSLSWEGEVRDAEGKILNKVNGTVEIPYISDENADEDPEVRVTVKDEDQIGKRLKEAMVAKGKPVVLDKVRVWLQSMARGGPVKEELEVKKVAAVAPQKSDDKAVEVKKKEEEVAAGVAKKEEKKKKKEGFKTISLTERFNCRARDLFEILMDENRWKGFTQSNARISKEVNGEFSIFDGSVTGMNLELQEGKLIVQRWRFGSWPDGMQSTVRIVFEEPESGVTVVKLTHTDVPEEDRYGNATVVENTERGWRDLIFQRIRAVFGFGI* 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g2317 357 SUPERFAMILY Activator of Hsp90 ATPase, Aha1 20 168 IPR036338 -
Lja5g2317 357 PANTHER HEAT SHOCK PROTEIN 90 HSP90 CO-CHAPERONE AHA-1 1 357 IPR039981 GO:0001671|GO:0051879
Lja5g2317 357 CDD SRPBCC_Aha1 222 355 - -
Lja5g2317 357 SMART Aha1_N_2 29 168 IPR015310 GO:0001671|GO:0051087
Lja5g2317 357 Gene3D - 220 356 IPR023393 -
Lja5g2317 357 Pfam Activator of Hsp90 ATPase homolog 1-like protein 233 353 IPR013538 -
Lja5g2317 357 Pfam Activator of Hsp90 ATPase, N-terminal 29 167 IPR015310 GO:0001671|GO:0051087
Lja5g2317 357 Gene3D - 18 179 IPR036338 -
Lja5g2317 357 PANTHER ACTIVATOR OF 90 KDA HEAT SHOCK ATPASE-LIKE PROTEIN 1 357 - -
Lja5g2317 357 SUPERFAMILY Bet v1-like 222 356 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g2317 Lja-Chr5 42062906 42064920 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g2317 - - gmx:100784184 534.643
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g2317 5 42062906 42064920 Lja5g2317 5 42062906 42064920 ECH
Lja1g1205 1 12391515 12393101 Lja5g2317 5 42062906 42064920 PCT