Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g1205 ATGGCGAAATACGGCGAGGGCGACAAACGGTGGATCGTGGAGGAAAGAACCGACGGCACCAACGTCCACAACTGGCACTGGTCCGAAACCAACTGTCTCGAATGGTCCAGAACCTTCTTCACCAACCTCCTCTCCGGCCTCACCATCCTCAACGGCGAAGGCAACCTCTTCATCAGAACGACGTCGCTCCGCACCCTCGACGGCGAGGCCTACGTCAACATTCGCAAAGGGAAGATCATCCCCGGTTACGAGATCAGCGTCACGGTTTCCTGGGAAGGTGAGGCCAAGGATTCCGATGGTAAATCGCTGCTCAAGGTTACCGGCGGCGTTGAGATTCCTTATATCTCCGACGAGAACGCCGATGAGGATCCTGAAGTTAGGGTTACGGTTAACGATGAGGGGCCAATTGGGAGGAGGATCAAGGAGGCTATGGTTTTGAAGGGGAAGCCGTTGGTTGTGGAGAAGGTGAAGAGTTGGGTGCAGAGTATGGCGAAAGGGGGTCCTGTTAAGGAGGAGCTGGAGACGAAGAAGGTGTCGCCGCCGCAGCAGAATCAGAATCAGAAGCCGGCGACGGAGGGTTCTGCTGCGCCGACGAAGGAGGTGAAGAAGGGGGTGAAGAGTATTAGATTGACGGAGAGGTTCAATTGCAGGGCGAGGGATTTGTATGAGATTTTGATGGATGAGAATAGATGGAAGGGTTTCACGCAGAGCAATGCGAGGATTAATAAGGAGGTTGGTGGGGATTTCAGCATTTTTGATGGGTCGGTGACAGGGACTAATTTGGAGTTGAAGGAAGCGAAGTTGATTGTGCAGAGATGGAGATTTGGGAGCTGGAATGATGGGGTTGTTTCCACGGTGAGGCTTGTGTTTGAGGAACCTGAACCTGGTGTTACTGTTGTTAAGCTGACACATAGTGATGTTCCTGAAGAAGATAGGTATGGGAATGCCACTGTAGTGGAGAACACGGAAAGGGGGTGGAAGGATCTCATTTTCCAAAGGATACGTGCAGTTTTTGGTTTTGGAATTTGA 1029 0.5199 MAKYGEGDKRWIVEERTDGTNVHNWHWSETNCLEWSRTFFTNLLSGLTILNGEGNLFIRTTSLRTLDGEAYVNIRKGKIIPGYEISVTVSWEGEAKDSDGKSLLKVTGGVEIPYISDENADEDPEVRVTVNDEGPIGRRIKEAMVLKGKPLVVEKVKSWVQSMAKGGPVKEELETKKVSPPQQNQNQKPATEGSAAPTKEVKKGVKSIRLTERFNCRARDLYEILMDENRWKGFTQSNARINKEVGGDFSIFDGSVTGTNLELKEAKLIVQRWRFGSWNDGVVSTVRLVFEEPEPGVTVVKLTHSDVPEEDRYGNATVVENTERGWKDLIFQRIRAVFGFGI* 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g1205 342 SUPERFAMILY Activator of Hsp90 ATPase, Aha1 20 165 IPR036338 -
Lja1g1205 342 MobiDBLite consensus disorder prediction 167 202 - -
Lja1g1205 342 Pfam Activator of Hsp90 ATPase homolog 1-like protein 218 338 IPR013538 -
Lja1g1205 342 MobiDBLite consensus disorder prediction 178 193 - -
Lja1g1205 342 PANTHER ACTIVATOR OF 90 KDA HEAT SHOCK ATPASE-LIKE PROTEIN 1 342 - -
Lja1g1205 342 Pfam Activator of Hsp90 ATPase, N-terminal 29 165 IPR015310 GO:0001671|GO:0051087
Lja1g1205 342 Gene3D - 18 176 IPR036338 -
Lja1g1205 342 Gene3D - 205 341 IPR023393 -
Lja1g1205 342 CDD SRPBCC_Aha1 207 340 - -
Lja1g1205 342 PANTHER HEAT SHOCK PROTEIN 90 HSP90 CO-CHAPERONE AHA-1 1 342 IPR039981 GO:0001671|GO:0051879
Lja1g1205 342 SUPERFAMILY Bet v1-like 207 341 - -
Lja1g1205 342 SMART Aha1_N_2 29 165 IPR015310 GO:0001671|GO:0051087
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g1205 Lja-Chr1 12391515 12393101 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g1205 - - gmx:100812897 573.933
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g1205 1 12391515 12393101 Lja1g1205 1 12391515 12393101 ECH
Lja1g1205 1 12391515 12393101 Lja5g2317 5 42062906 42064920 PCT