Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g2312 ATGAGGATCCGGAAGAGGCAAGTGTCTCTTTCTCTTTTGCCAGTGACACACTCAGATCCCAACCTGATTAGCCGGTCACCGGTCCTGGTGCAACTCCACGGTGCTGCAACCACCTCACCGAAACCTTCTTGCACTCATGCCTCAGCTACTGCACTGATGCTCCTCTCAGATCCTCCTGGGCCGTCCGATCATCCTCGCAGACCGATCGAGAAACCAACCGACGGCTGTGATGATCCCTTCAGTGATAGCGAAGCAAACAGGAGGCAGCACAAGAAGCAAGAATGTTTGGTGGAAGATGGAGGAGGGGGACATAAGGTTAATGATTCCAGGAAAGAAGTCGTCTTGTGTTCAGAAATAATGCCAGCTAAGACGATCTTCTCACCTTCAATCCCTTATAGTTCTAAACAAGATGGGAGATGGTGCGAGGCAGAGAAAGCCTTTCCTCTAAAGAAACGAAGAGGGAGCTTTGAGAATGTAACCAAGGTCAACAATAACAACAATGATAACAGTAGTAATAAGAAAAAGAAGAAGACGAGGATGAAGATGAGCAAGAAATGCTCAGTGCAAGATGACAGCGATGACAACAATGAAGAGAGTGAAGAAGAGGAAGAAGAAAAGGCCGTGAAAACAAAGAAGAGAGTGAGGGGTGGTGCAATTATGGAAGGGTCACGGTGCAGTCGTGTGAATGGGAGGGGATGGAGGTGCTGTCAACAAACACTGGTTGGATATTCACTTTGCGAGCATCACTTGGGGAAAGGAAGGTTGAGAAGCATGACAAGTGTGGGAAACAGATCTTCTGCTACCACAACACAAGGTGCTGCTGAACTGAAGAAGAATCACGTGCAAGACCACACGGCATTATCTAAATCTTCACCTTCATTCCCTGAGAAGAAAACCAAGTGTGCTGGAAGTGAAAGTGATGAAGAAGATAATGATGATGAGAAGAAGCCACTTATTGTCACGAAGAAGAAGCTTGGAATGGTGAAAGCGCGTTCGATAAGCAGCTTGCTTGGACAAGCTAACCAACCTTGA 1032 0.469 MRIRKRQVSLSLLPVTHSDPNLISRSPVLVQLHGAATTSPKPSCTHASATALMLLSDPPGPSDHPRRPIEKPTDGCDDPFSDSEANRRQHKKQECLVEDGGGGHKVNDSRKEVVLCSEIMPAKTIFSPSIPYSSKQDGRWCEAEKAFPLKKRRGSFENVTKVNNNNNDNSSNKKKKKTRMKMSKKCSVQDDSDDNNEESEEEEEEKAVKTKKRVRGGAIMEGSRCSRVNGRGWRCCQQTLVGYSLCEHHLGKGRLRSMTSVGNRSSATTTQGAAELKKNHVQDHTALSKSSPSFPEKKTKCAGSESDEEDNDDEKKPLIVTKKKLGMVKARSISSLLGQANQP* 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g2312 343 MobiDBLite consensus disorder prediction 258 276 - -
Lja5g2312 343 PANTHER OS02G0773600 PROTEIN 28 340 - -
Lja5g2312 343 PANTHER - 28 340 IPR031137 GO:0005634|GO:0006351|GO:0032502
Lja5g2312 343 MobiDBLite consensus disorder prediction 257 318 - -
Lja5g2312 343 ProSiteProfiles WRC domain profile. 219 263 IPR014977 -
Lja5g2312 343 MobiDBLite consensus disorder prediction 63 107 - -
Lja5g2312 343 Pfam WRC 221 261 IPR014977 -
Lja5g2312 343 MobiDBLite consensus disorder prediction 156 211 - -
Lja5g2312 343 MobiDBLite consensus disorder prediction 53 107 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g2312 Lja-Chr5 41809534 41812125 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g2312 - - lja:Lj0g3v0275489.2 583.948
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g2312 5 41809534 41812125 Lja5g2312 5 41809534 41812125 ECH
Lja1g1215 1 12566934 12569098 Lja5g2312 5 41809534 41812125 PCT