Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g1215 ATGAGGATCCGGAAAAGCCAGACGCTTTTCTCCTCTTTCTCTCTCTCAGATCCCCACCTCACCAACCGGTTACCACCGGCGTTGGTGCAACTCGCCGTCGACGCCGCACCAAAAGCTGAAGAAGCTCCGTTGAGCTTAGATCGCTGTCGTCCGTCTGATCATCCACTCCTACCGAGCAACGGCTGCGATGATCCCTCCGGTGAAGGTGGGGCACACAGGCCGCAGCAGCGCAACAAGCAAGAACCTTTGGAAGAGGTGGAAGATGTTAGAGGGCAACTAGGAAAGGGAGACTCAGCAGGAGAGAAGGGTAATCATACCAGGAAAGGATGCATCTTTGGCTCAGAAGTGATGCAAGTTGATAGCTTTCCACCACCAAGTCCTCCTTCAACTCAAGATGGGAGATGGTATGATGGAGAGAGATCTATTCCTCTCAAGAAACGGAGAGGGAGCTTTGAGAATAATAATGCTACTGCTGCTAGTCATGATAATAAGAAGATGAAGACGAAGATGAATAAGAAATGTTCATCATCAGCTACCCAGAATGGTGATGATGTGGACCGTGTTGGTGATGATGTGAGTGCGAGTAATGGTAAGAAGAGGGCGAGGGGGAGTGCAGTGATGGAAGGTTCGCGGTGCAGCCGTGTGAACGGGAGAGGATGGCGGTGCTGTCAGCCGACACTGGTGGGTTACTCGCTGTGTGAGCATCACTTGGGGAAAGGGAGGCTGAGGAGCATGGCCAGTGTTAGAAACCGTTCTATGAAGAAGGAGGTGCAAGACTTGCTGCCTCAACCGTCTTCTTGTGGTGGTGATAATTCGTCTTCTTCTTCTTCTCTTGAAAGGAAAAACAAGTCTGGTGGTGCTGATTATCCTCTTGGGAAGAGTGAGAAGAAGGCGGCGGTGGCAGTGACAAAGAAGAGAATGAAGCTGGGAATGGTGAAAGCAAGGTCCATGAGCAGCTTGATGGGACAAACAAACACCCAGGTTGTTGTTGCAGATGAGAATAACAAGTAA 1011 0.5045 MRIRKSQTLFSSFSLSDPHLTNRLPPALVQLAVDAAPKAEEAPLSLDRCRPSDHPLLPSNGCDDPSGEGGAHRPQQRNKQEPLEEVEDVRGQLGKGDSAGEKGNHTRKGCIFGSEVMQVDSFPPPSPPSTQDGRWYDGERSIPLKKRRGSFENNNATAASHDNKKMKTKMNKKCSSSATQNGDDVDRVGDDVSASNGKKRARGSAVMEGSRCSRVNGRGWRCCQPTLVGYSLCEHHLGKGRLRSMASVRNRSMKKEVQDLLPQPSSCGGDNSSSSSSLERKNKSGGADYPLGKSEKKAAVAVTKKRMKLGMVKARSMSSLMGQTNTQVVVADENNK* 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g1215 336 MobiDBLite consensus disorder prediction 174 202 - -
Lja1g1215 336 PANTHER OS02G0773600 PROTEIN 29 332 - -
Lja1g1215 336 MobiDBLite consensus disorder prediction 1 19 - -
Lja1g1215 336 MobiDBLite consensus disorder prediction 264 282 - -
Lja1g1215 336 ProSiteProfiles WRC domain profile. 206 250 IPR014977 -
Lja1g1215 336 PANTHER - 29 332 IPR031137 GO:0005634|GO:0006351|GO:0032502
Lja1g1215 336 MobiDBLite consensus disorder prediction 1 22 - -
Lja1g1215 336 MobiDBLite consensus disorder prediction 257 296 - -
Lja1g1215 336 Pfam WRC 208 248 IPR014977 -
Lja1g1215 336 MobiDBLite consensus disorder prediction 38 137 - -
Lja1g1215 336 MobiDBLite consensus disorder prediction 74 104 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g1215 Lja-Chr1 12566934 12569098 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g1215 - - lja:Lj1g3v4328790.1 650.588
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g1215 1 12566934 12569098 Lja1g1215 1 12566934 12569098 ECH
Lja1g1215 1 12566934 12569098 Lja5g2312 5 41809534 41812125 PCT