Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g2186 ATGGGTTCTGAAGGACAGCTCAAGCTTCCTGTTTTTGATTTAACAAAAGAAGATTTGAAGCCAGGGACCAGTTCCTGGCTATCAACGTGCACAAGTGTGCGGCAAGCATTTGAAAAGTATGGCTGCTTTGTAGTCTTATATGATAAAGCTTCTGATGAGCTTCATAGTGATGTGTTCGGTTCCCTGAAGGAGCTATTCAATCTCCCAACAGAGACCAAACTGAGAAACATATATGAGGGGAAACCCTTAAAAGGCTACGTTGGACAGCATCCCAAGATTCCTCTTCATGAAAGCATGGGCATAGATGATGGCTCAACACTAGAAGGAATTCAAAGTTTTGTTGAAAATATGTGGCCTAACGGAAATGAAAAAAAATGTTTGTTTGGGTATGCAAATGTTGCCGAAGGGTTGGATAAGATGGTGGTCATAATGATTTTTGAAAGTTATGGTTTAATGAAGTACTATGAAGAGTACATAGGGTCTACAAATTATCTCCTTCGGCTCTTGGCTCACAAAGCACCAGAACAGGTGGAACCTCAACTGGGTTTTGTCTCTCACACTGACAAAAGCTTCACAACAATTCTTCACCAGAATCGTGTCAATGGGCTCGTGGTGGAGACAAAGGATGGTGATTGGATTGATGTTGATTTCTCTGCACCTAATTCCTTTGTCGTCATGGCTGGCGATGCGCTCATGGCCTGGAGCAACAACAGAGTAAAGTCTCCTAATCATAAAGTTATGATGAATGGCAATGAAACAAGGTACTCTCTTGGTCTGTTTGCCTTCTACAGAGGAATTCTACAAGTACCTGCTGAGTTAATTGACGAGGAACACCCCTTGCAGTATAAGCGTCGTTTGATCATCTTGCATTATTGA 876 0.4201 MGSEGQLKLPVFDLTKEDLKPGTSSWLSTCTSVRQAFEKYGCFVVLYDKASDELHSDVFGSLKELFNLPTETKLRNIYEGKPLKGYVGQHPKIPLHESMGIDDGSTLEGIQSFVENMWPNGNEKKCLFGYANVAEGLDKMVVIMIFESYGLMKYYEEYIGSTNYLLRLLAHKAPEQVEPQLGFVSHTDKSFTTILHQNRVNGLVVETKDGDWIDVDFSAPNSFVVMAGDALMAWSNNRVKSPNHKVMMNGNETRYSLGLFAFYRGILQVPAELIDEEHPLQYKRRLIILHY* 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g2186 291 Pfam non-haem dioxygenase in morphine synthesis N-terminal 9 89 IPR026992 -
Lja5g2186 291 Pfam 2OG-Fe(II) oxygenase superfamily 164 261 IPR044861 -
Lja5g2186 291 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 161 265 IPR005123 -
Lja5g2186 291 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN 3 283 - -
Lja5g2186 291 SUPERFAMILY Clavaminate synthase-like 7 284 - -
Lja5g2186 291 Gene3D - 2 287 IPR027443 -
Lja5g2186 291 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 3 283 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g2186 Lja-Chr5 35394737 35400658 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja5g2186 124 283 Glycosyltransferase AT5G59530 28.824 3.60e-11 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g2186 - - gmx:100809268 460.299
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g2186 5 35394737 35400658 Lja1g1346 1 14192842 14200327 PCT