Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g2138 ATGATGGGTAAAGATAGTAGTGTGATGAAAGCATGGGAGGCAACAGTACGAAAGACTCAAGCGGTTGCAAAGAAACGTGCCAACAGCATATTCGGGACAACGTATGTGGCACATGCAGATGAAGAAGAGAACAACCAGGATGAGCAAAGTGGAAGTGAAACATCATCAGGATGCGAAATCTACCACGCAGAGAGGGTTCTTCCAAATGGGGATTATTACAAAGGAGAATGGGCAGATAATTTCCCACACGGGAAGGGAAAATACTTGTGGACGGATGGGTGCATGTATGTTGGAGAATGGTTCAAAGGAAAGACAATGGGAAAAGGACGGTTCAATTGGCCATCTGGACCGAGTTATGAAGGAGAATTCAAAAACGGTTACATGGATGGAATAGGAACATACACGGCCTCTAATGGGGATACCTATAAGGGACAATGGGTGATGAATTTGAAACACGGACAAGGTGTGAAGAGTTTTGCGAATGGGGATTGCTACGAAGGGGAATGGAGAAGGGGGTTACAAGATGGGCAAGGGAAGTATAAGTGGAAGGATGAGAATTATTACATAGGGGAATGGAGGAATGGGTGTATTTGGGGGAAAGGTTCGTTTGTTTGGGGTAATGGGAATAGGTATGATGGGTATTGGGAAGATGGTTTGCCAAAAGGGAACGGAACTTTCAAATGGGCTGATGGGAGTTTTTACATGGGGAATTGGAGCAAGGATCTGAGGGATCAGAGTGGGACATATTATCCTTCTTCAGGGTCAGCGTCCTCGCAAGATGGTCATCTTGAGTGGGATCCAAACCAGGTGTTTGATGAATTGACTGAGTATCTGATTTGTCCAGGGGAGAAAGTTTCAATTTTGCCGTCGCAGAAGCGTCTCGCGGTGTGGCGGTCAACAAAGGGAGGGGAGGGTGCGAAGCCAAGGAGGATGTCGGTGGATGGGAGGGTAAGCGTTGGGCTGGAAAAGCCAAGTGATAGGATGCATTTGTGGGGTGGTAGTGGTGGGGAGGGTGATAAAACTCCAACAAGACGAGGAGGTGCTAATTTGGACCAGGAATTGTTGGATTTGCATATAGATGGTGCTAATCTAAGAGAGACTCAACTCCTTACTCTCAAAGCACCAAGGAAATCAAAGAGGCAAGGAGAGACCATAAGCAAAGGACATAAAAATTACGAGCTCATGCTCAATTTGCAATTGGGAATCAGGCATTCTGTTGGAAGACCTGCGCCATCAGCATCACTTGATCTAAAGCCTTCAGCTTTTGATTCCAAGGAGAAAGTGTGGACAAGGTTTCCTCCTGAAGGATCAAAGTATACGCCACCACACCCATCGTCTGAATTCAAGTGGAAGGACTATTGCCCGGTAGTTTTTAGAACTCTTAGGAAGCTCTTCAAGGTGGATGCTGCTGATTACATGTTATCCATATGCGGAAATGATGCACTACGCGAACTTTCCTCTCCGGGAAAAAGTGGCAGCTTCTTCTATTTGACCAATGATGACCGTTACATGATAAAAACAATGAAGAAAGCTGAGGCAAAAGCTCTCTTGCGAATGCTTCCAGCTTATTATAATCATTTTCGAGCATTTGAAAATGCTATGCTCACAAAGTTTTATGGCTTGCATTGTGTAAAGTTAACTGGACCTGCTCAGAAGAAGGTTCGTTTTATCATTATGGGAAACCTTTTCTGTTCTGAGTATACCATCCATAGGCGCTTTGATTTGAAGGGTTCTTCACTTGGCCGCATCACTATTAAGCCCGAGTCAGATATTACTGAAAATACCATCCTTAAAGATCTTGATCTCAATTTTATATTCCGATTACAACGAGCTTGGTTTCAAGAATTTTGCAGGCAAATTGATAGGGATTGTGAGCTTTTAGAACAGGAGGGAATCATGGACTATAGTTTGCTAGTTGGGATTCATTTCAAAGATATATCAGAAGAAGGGGAACTTATTCCTTCAGGATCTCACACATCTGCTGAGAATGAAGGAACTCCCCATATTTCACGAGCAGACGTGGATCACCTTCTTCTAGATCCTTCCAGGTGGGAAAGTATAAAATTCGGTGTGAATATGCCAGCTAGGGTCGAAAGGACGATGAGAAGATGTGATTGTGAATTACAGCTTGTAGGAGAACCAATTGGAGAGTTTTATGAGGTTGTATTATTTTTTGGCATCATAGATATACTTCAAGATTATGATATCAGCAAGAAGCTTGAGCACGCTTACAAGTCCATTCAATATGACCCAACCTCAATATCAGTCGTTGATCCAAGACAGTATTCAAGGCGTTTTCGTGACTTCTTATTCAAAATATTTTCTGAAGACTCTTGA 2337 0.4339 MMGKDSSVMKAWEATVRKTQAVAKKRANSIFGTTYVAHADEEENNQDEQSGSETSSGCEIYHAERVLPNGDYYKGEWADNFPHGKGKYLWTDGCMYVGEWFKGKTMGKGRFNWPSGPSYEGEFKNGYMDGIGTYTASNGDTYKGQWVMNLKHGQGVKSFANGDCYEGEWRRGLQDGQGKYKWKDENYYIGEWRNGCIWGKGSFVWGNGNRYDGYWEDGLPKGNGTFKWADGSFYMGNWSKDLRDQSGTYYPSSGSASSQDGHLEWDPNQVFDELTEYLICPGEKVSILPSQKRLAVWRSTKGGEGAKPRRMSVDGRVSVGLEKPSDRMHLWGGSGGEGDKTPTRRGGANLDQELLDLHIDGANLRETQLLTLKAPRKSKRQGETISKGHKNYELMLNLQLGIRHSVGRPAPSASLDLKPSAFDSKEKVWTRFPPEGSKYTPPHPSSEFKWKDYCPVVFRTLRKLFKVDAADYMLSICGNDALRELSSPGKSGSFFYLTNDDRYMIKTMKKAEAKALLRMLPAYYNHFRAFENAMLTKFYGLHCVKLTGPAQKKVRFIIMGNLFCSEYTIHRRFDLKGSSLGRITIKPESDITENTILKDLDLNFIFRLQRAWFQEFCRQIDRDCELLEQEGIMDYSLLVGIHFKDISEEGELIPSGSHTSAENEGTPHISRADVDHLLLDPSRWESIKFGVNMPARVERTMRRCDCELQLVGEPIGEFYEVVLFFGIIDILQDYDISKKLEHAYKSIQYDPTSISVVDPRQYSRRFRDFLFKIFSEDS* 779
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g2138 778 Gene3D - 562 774 - -
Lja5g2138 778 SUPERFAMILY SAICAR synthase-like 387 774 - -
Lja5g2138 778 PANTHER PHOSPHATIDYLINOSITOL 4-PHOSPHATE 5-KINASE 4 19 777 - -
Lja5g2138 778 CDD PIPKc_AtPIP5K_like 391 773 - -
Lja5g2138 778 PIRSF PIP5K_plant 8 778 IPR017163 GO:0005524|GO:0016308
Lja5g2138 778 Pfam Phosphatidylinositol-4-phosphate 5-Kinase 477 772 IPR002498 GO:0016307|GO:0046488
Lja5g2138 778 Gene3D Phosphatidylinositol Phosphate Kinase II Beta 377 561 IPR027484 -
Lja5g2138 778 Gene3D - 103 150 - -
Lja5g2138 778 Gene3D - 167 259 - -
Lja5g2138 778 Gene3D - 57 102 - -
Lja5g2138 778 SMART PIPK_2 418 775 IPR002498 GO:0016307|GO:0046488
Lja5g2138 778 MobiDBLite consensus disorder prediction 38 59 - -
Lja5g2138 778 ProSiteProfiles Phosphatidylinositol phosphate kinase (PIPK) domain profile. 384 774 IPR002498 GO:0016307|GO:0046488
Lja5g2138 778 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 68 195 - -
Lja5g2138 778 Pfam MORN repeat 188 210 IPR003409 -
Lja5g2138 778 Pfam MORN repeat 96 116 IPR003409 -
Lja5g2138 778 Pfam MORN repeat 234 251 IPR003409 -
Lja5g2138 778 Pfam MORN repeat 142 163 IPR003409 -
Lja5g2138 778 Pfam MORN repeat 211 232 IPR003409 -
Lja5g2138 778 Pfam MORN repeat 119 141 IPR003409 -
Lja5g2138 778 Pfam MORN repeat 165 185 IPR003409 -
Lja5g2138 778 Pfam MORN repeat 73 95 IPR003409 -
Lja5g2138 778 PANTHER PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE 19 777 IPR023610 -
Lja5g2138 778 SMART morn 140 161 IPR003409 -
Lja5g2138 778 SMART morn 117 138 IPR003409 -
Lja5g2138 778 SMART morn 71 92 IPR003409 -
Lja5g2138 778 SMART morn 94 115 IPR003409 -
Lja5g2138 778 SMART morn 186 207 IPR003409 -
Lja5g2138 778 SMART morn 232 253 IPR003409 -
Lja5g2138 778 SMART morn 163 184 IPR003409 -
Lja5g2138 778 SMART morn 209 230 IPR003409 -
Lja5g2138 778 MobiDBLite consensus disorder prediction 325 344 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g2138 Lja-Chr5 30444924 30459446 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja5g2138 1 778 Acyl Lipid Metabolism Gene Families AT3G56960 70.342 0.0 1159
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g2138 K00889 - gmx:100782728 1385.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g2138 5 30444924 30459446 Lja5g2138 5 30444924 30459446 ECH
Lja1g0799 1 7740327 7748254 Lja5g2138 5 30444924 30459446 PCT