Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g0799 ATGGGGGAGCACTTTCTTATGCAGAGAGAAACAAAATCTTTTAATGCCAGTTCTGAAATAAACAATAATCTATCTTTAGTGACAATCGGTGAAGCTGGTCATTCCTCTGAAATTGATAGCTTCAGTGTAGGAGAACTCTTACTTTCTAATGGAGAATCATATTCTGGGACCCTTTTTGGCAATACTCCTGAGGGCCATGGTACCTATGTGTGGTCTGATCGGTGTGTATATGAAGGTGGCTGGAGGCGGGGGATGAGACATGGGAATGGAAAAATAAGATGGCCTTATGGAGCTGTGTATGAGGGTGAGTTTTCTGGTGGCTATATCCAGGGTACAGGGAAGTATATTGGTTCTGATCATTTGACCTATAAAGGTAGGTGGCGATTGAATCTTAAACACGGTCTTGGTTATCAAGTTTATCCTAATGGAGATATCCTTGAAGGGTCTTGGATACAAGGAACACCAGAGGGGCCTGGAAAGTATACCTGGACCAATGGAAATGTATATGTAGGGAATATGAAAGGTGGAACGATGTCAGGAAAAGGAACTCTCACTTGGATAAATGGGGACTCATATGAAGGAAGCTGGTTAAATGGCATGATGCATGGTTTTGGAGCGTACACTTGGAGTGGTGGAGGCTGCTATGTTGGGACTTGGACATGTGGTCTTAAAGATGGCAAAGGAACCTTTTATCCAAAAGGAAGCCATCTTACATCAGCGCAGGAAATTTACCTCAATGCCTTGAGAAAAAGAGGGCTATTGCCTGATTTGAGAAAGCAGAATCTGGTGAGAGGTGTCAAGGTTGGTGAAAACCAGAGATCGAATCGTGTTTCATCTGATAAGCTTGCTAAAGGAAACCTGTTAAATCTTGAAGATTCTAGTAGAAGAAATGTTTCTCTTGAAAGGCGCTGGAGTCTTGAGGTATCTATCGAGAAAGGGATCGGACATGATTCAACCTTAGGCTCAGCAGAATCTGTATCACAAAGAAAAGATAAAGAGGCTAATGCAAAGATGCCAATTTTGGAACGAGAGTACATGCAAGGCGTATTAATAAGTGAGCTAGTTTTAGACAAATTTTTATCAAAGTCTAGAAAGGAGCGGCGGCTTCAGAAGAAACTCGCCAAAGAGATTAAAAGACCTGGTGAAGCAATCATTAAAGGTCACAGGAGTTATGATCTAATGCTCAGTTTGCAGCTGGGAATAAGGTATACTGTGGGCAAGATTACGCCTGTACCAAGGCGAGAAGTTCGAGCATCAGATTTTGGTTCCAAAGCAAGCTTTTGGATGAATTTTCCTAGAGAAGGTTCTCCATTAACCCCTTCTCATCAATCAGAGGATTTTAAATGGAAAGATTATTGTCCAATGGTGTTCAGAAATTTAAGAGAGTTGTTCAAGATTGATGCTGCTGACTACATGATATCCATTTGTGGAAACGATGCTTTGAGGGAACTATCCTCTCCAGGGAAAAGTGGCAGTGTCTTTTTCCTGTCACAGGATGATCGGTTCATGATCAAGACGCTGCGAAAATCTGAACTAAAGATTTTTCTAAGAATGCTTCCAGACTATCATCATCATGTGAAGTCATACGAAAATACACTCATCACGAAATTTTTTGGCCTGCACAGGATTAAGCCTTCAAGTGGTCAAAAGTTTCGCTTCGCAGTAATGGGAAATATGTTCTGCACAGAGTTAAGGATACATCGGAGATTTGATTTAAAAGGTTCGTCCTTTGGACGATCATCAGACAAGATAGAAATTGATGAGAATACCACTCTTAAAGATTTGGATCTAAATTACTCCTTCTTCTTGGAACCATCTTGGCGGGATTCTTTATTGAACCAAATCAAAATAGACAGCAAATTTTTGGAAGCACAGCACATTATGGATTACAGTCTTCTTCTCGGCGTTCACTATCGAGCACCCCAGCATGTCCGTCCTCTCATGTCATACAACCAGAGGAGTATAAGTACGGATGGATTAGCAGTGCTTGCAGAAGAAGACCCTCTGGAAGATGAAGTATTCAACTATCCACAAGGCCTTGTTCTGGTTCCTCGAGGAGCAGGTGATAATAGTGTCGTTGTGGGCTCACACATGAGGGGTGGCCGATTGCGAGCTTCATCCGCCGGGGATGAGGTGGTGGATCTACTTCTACCTGGTACAGCAAGACTTCAAATCCAGCTAGGGGTGAATATGCCATCAAGGGCAGAGCAGAATCAGATTATAGGAAAGCAAGAAAAGCAAATGTTCCATGAGGTGAACGATGTTGTACTGTACCTGGGTATCATTGACATATTGCAAGACTACAACATGACTAAGAAGCTTGAACATGCCTATAAATCTCTTCAATTTGATTCAGTATCTATCTCAGTTGTGGACCCTGCATTCTACTCTCGTCGTTTCCTGGAATTCATCCAGAAAGTGTTTCCACCAAATGCATCTACAGGTTAA 2448 0.4203 MGEHFLMQRETKSFNASSEINNNLSLVTIGEAGHSSEIDSFSVGELLLSNGESYSGTLFGNTPEGHGTYVWSDRCVYEGGWRRGMRHGNGKIRWPYGAVYEGEFSGGYIQGTGKYIGSDHLTYKGRWRLNLKHGLGYQVYPNGDILEGSWIQGTPEGPGKYTWTNGNVYVGNMKGGTMSGKGTLTWINGDSYEGSWLNGMMHGFGAYTWSGGGCYVGTWTCGLKDGKGTFYPKGSHLTSAQEIYLNALRKRGLLPDLRKQNLVRGVKVGENQRSNRVSSDKLAKGNLLNLEDSSRRNVSLERRWSLEVSIEKGIGHDSTLGSAESVSQRKDKEANAKMPILEREYMQGVLISELVLDKFLSKSRKERRLQKKLAKEIKRPGEAIIKGHRSYDLMLSLQLGIRYTVGKITPVPRREVRASDFGSKASFWMNFPREGSPLTPSHQSEDFKWKDYCPMVFRNLRELFKIDAADYMISICGNDALRELSSPGKSGSVFFLSQDDRFMIKTLRKSELKIFLRMLPDYHHHVKSYENTLITKFFGLHRIKPSSGQKFRFAVMGNMFCTELRIHRRFDLKGSSFGRSSDKIEIDENTTLKDLDLNYSFFLEPSWRDSLLNQIKIDSKFLEAQHIMDYSLLLGVHYRAPQHVRPLMSYNQRSISTDGLAVLAEEDPLEDEVFNYPQGLVLVPRGAGDNSVVVGSHMRGGRLRASSAGDEVVDLLLPGTARLQIQLGVNMPSRAEQNQIIGKQEKQMFHEVNDVVLYLGIIDILQDYNMTKKLEHAYKSLQFDSVSISVVDPAFYSRRFLEFIQKVFPPNASTG* 816
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g0799 815 PANTHER PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE 7 811 IPR023610 -
Lja1g0799 815 SMART PIPK_2 417 809 IPR002498 GO:0016307|GO:0046488
Lja1g0799 815 PIRSF PIP5K_plant 3 812 IPR017163 GO:0005524|GO:0016308
Lja1g0799 815 ProSiteProfiles Phosphatidylinositol phosphate kinase (PIPK) domain profile. 387 808 IPR002498 GO:0016307|GO:0046488
Lja1g0799 815 SMART morn 98 119 IPR003409 -
Lja1g0799 815 SMART morn 52 73 IPR003409 -
Lja1g0799 815 SMART morn 213 234 IPR003409 -
Lja1g0799 815 SMART morn 167 188 IPR003409 -
Lja1g0799 815 SMART morn 75 96 IPR003409 -
Lja1g0799 815 SMART morn 144 165 IPR003409 -
Lja1g0799 815 SMART morn 121 142 IPR003409 -
Lja1g0799 815 SMART morn 190 211 IPR003409 -
Lja1g0799 815 Gene3D - 79 130 - -
Lja1g0799 815 Gene3D - 198 241 - -
Lja1g0799 815 Gene3D - 148 197 - -
Lja1g0799 815 Pfam Phosphatidylinositol-4-phosphate 5-Kinase 476 806 IPR002498 GO:0016307|GO:0046488
Lja1g0799 815 PANTHER PHOSPHATIDYLINOSITOL 4-PHOSPHATE 5-KINASE 7 811 - -
Lja1g0799 815 Gene3D Phosphatidylinositol Phosphate Kinase II Beta 376 558 IPR027484 -
Lja1g0799 815 SUPERFAMILY SAICAR synthase-like 386 808 - -
Lja1g0799 815 CDD PIPKc_AtPIP5K_like 390 807 - -
Lja1g0799 815 Gene3D - 559 808 - -
Lja1g0799 815 Pfam MORN repeat 77 95 IPR003409 -
Lja1g0799 815 Pfam MORN repeat 147 168 IPR003409 -
Lja1g0799 815 Pfam MORN repeat 123 144 IPR003409 -
Lja1g0799 815 Pfam MORN repeat 54 75 IPR003409 -
Lja1g0799 815 Pfam MORN repeat 169 190 IPR003409 -
Lja1g0799 815 Pfam MORN repeat 100 120 IPR003409 -
Lja1g0799 815 Pfam MORN repeat 192 213 IPR003409 -
Lja1g0799 815 Pfam MORN repeat 215 235 IPR003409 -
Lja1g0799 815 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 49 176 - -
Lja1g0799 815 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 165 236 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g0799 Lja-Chr1 7740327 7748254 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g0799 11 811 Acyl Lipid Metabolism Gene Families AT3G09920 70.948 0.0 1169
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g0799 K00889 - gmx:100800418 1343.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g0799 1 7740327 7748254 Lja1g0799 1 7740327 7748254 ECH
Lja1g0799 1 7740327 7748254 Lja5g2138 5 30444924 30459446 PCT