Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g2011 ATGGGTGCTTCACAATCAATCTCTGAAAATTCCATTCATGAATTCGCAGTAAAGGATGCCAGAGGAAAAGATGTGAATCTCAATGTCTACAAGGGGAAAGTTCTTCTTGTAGTTAATGTTGCTTCAAAATGTGGGTTTGCGGAGGCCAATTACACTCAGTTAACTCAGCTTTACACCAGATACAAGGGCAGTGGTCTTGAGATATTGGCATTTCCATGCAATCAATTTTTGAGGAAAGAGCCAGGGACTAGCCAGGAGGCACAAGATTTTGTCTGTACAAGATACAAGGCTGTATATCCCATTTTTGGGAAGGTACGTGTGAATGGACCAGATACAGCTCCTGTTTATAAATTCCTGAAATCACAGAAATCTGGATCTTTGGGGGCTAGGATCAAGTGGAATTTCACTAAGTTTTTAGTCGATGAGGAAGGTCATGTCATCCGCCGCTATAGCCCAACTACCCCACCATTGGCCATTGAAAATGACATCAAGAAGGCATTGAGGGTGGCTTGA 513 0.4269 MGASQSISENSIHEFAVKDARGKDVNLNVYKGKVLLVVNVASKCGFAEANYTQLTQLYTRYKGSGLEILAFPCNQFLRKEPGTSQEAQDFVCTRYKAVYPIFGKVRVNGPDTAPVYKFLKSQKSGSLGARIKWNFTKFLVDEEGHVIRRYSPTTPPLAIENDIKKALRVA* 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g2011 170 Gene3D Glutaredoxin 3 169 - -
Lja5g2011 170 PIRSF Glutathion_perox 1 170 IPR000889 GO:0004602|GO:0006979
Lja5g2011 170 Pfam Glutathione peroxidase 12 120 IPR000889 GO:0004602|GO:0006979
Lja5g2011 170 ProSitePatterns Glutathione peroxidases active site. 32 47 IPR029759 -
Lja5g2011 170 ProSitePatterns Glutathione peroxidases signature 2. 69 76 IPR029760 -
Lja5g2011 170 PANTHER GLUTATHIONE PEROXIDASE 1 170 IPR000889 GO:0004602|GO:0006979
Lja5g2011 170 PANTHER GLUTATHIONE PEROXIDASE 1 170 - -
Lja5g2011 170 SUPERFAMILY Thioredoxin-like 11 167 IPR036249 -
Lja5g2011 170 ProSiteProfiles Glutathione peroxidase profile. 2 170 IPR000889 GO:0004602|GO:0006979
Lja5g2011 170 PRINTS Glutathione peroxidase family signature 30 47 IPR000889 GO:0004602|GO:0006979
Lja5g2011 170 PRINTS Glutathione peroxidase family signature 66 82 IPR000889 GO:0004602|GO:0006979
Lja5g2011 170 PRINTS Glutathione peroxidase family signature 131 140 IPR000889 GO:0004602|GO:0006979
Lja5g2011 170 CDD GSH_Peroxidase 11 163 IPR000889 GO:0004602|GO:0006979
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g2011 Lja-Chr5 26186666 26188031 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g2011 - K00432 gmx:100527283 303.138
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g2011 5 26186666 26188031 Lja5g2011 5 26186666 26188031 ECH
Lja1g1152 1 11828538 11833626 Lja5g2011 5 26186666 26188031 PCT