Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g2006 ATGAAGAGAGTCAAGATTTTTAATTTCACAATAACTCTTGCTCTGATATTTCTGGCATCTGTGCCAAAAATGGAGAGCCGTATACCAGTGTTTCCTTTTCCATCATCACCTCCTCACCCACTTTGTGCATCTCAACTAGCACTAGTAAACTATGCTTGTGCCAGGTTGCCTTTCACCCCAGGATCACCGCCATCTTCCCAACTCACATCCACTAATGATGACGGTGAGGGACACGGGAGTAGACACGGCCACGGACATCGCCGCCACCACCACCACCACAGCTCGCCTCAAGAAGAAAACTGTTGCCGGTGGGCTGGAGAATTGGACAGCCAGTGTGTGTGTGAGATCTTGGTTCGATTGCCTCCTTTCCTTACAAGACCTGCGCATCAGTACTCCGTCACCATTGGAGAATCTTGTAACATCACTTACTCGTGTGGTGGGCCAATATGA 450 0.4911 MKRVKIFNFTITLALIFLASVPKMESRIPVFPFPSSPPHPLCASQLALVNYACARLPFTPGSPPSSQLTSTNDDGEGHGSRHGHGHRRHHHHHSSPQEENCCRWAGELDSQCVCEILVRLPPFLTRPAHQYSVTIGESCNITYSCGGPI* 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g2006 149 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN 1 149 - -
Lja5g2006 149 MobiDBLite consensus disorder prediction 62 96 - -
Lja5g2006 149 PANTHER - 1 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g2006 Lja-Chr5 26130269 26130718 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g2006 - - pvu:PHAVU_007G170000g 167.548
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g1150 1 11803989 11804459 Lja5g2006 5 26130269 26130718 PCT