Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g1150 ATGGAAAGAGTTGATATTCTCATGGTTACAATGGCTCTGACATTGCTAGCATTGGTGCCAAAAACAGAGAGCCATGTCGGAGCTGAAGGCCATGTTGTTCCTCGCCCACTCTGCGCATCACAATTCGCACTGGTCAACTACGCCTGCGGAAGGCTTCCGTTCTCACCAGGGGTCCCACCTGCACCCGTGCCTGCTCCACCGTCTCCTCCGTCCCCTGATGACGAGCGCAGTCACCGCCACCGCCAGGGACATGGTGGCGGTGGTCATGGGCACGGACACCGCCACAGGCACCACCGGGAGAGCACTCCCGATGAGGAGAACTGTTGCCGATGGGCCAAGGACGTGGACACACAATGCGTGTGTGAGCTTCTTGTTCACCTGCCTCCTTTCCTTGTTAAACCTGCGCATCAGTACACACTCATTGTCGGAGAAGAATGCCAAATCACTTACTCTTGCGGTGGCCCTATCTGA 471 0.5669 MERVDILMVTMALTLLALVPKTESHVGAEGHVVPRPLCASQFALVNYACGRLPFSPGVPPAPVPAPPSPPSPDDERSHRHRQGHGGGGHGHGHRHRHHRESTPDEENCCRWAKDVDTQCVCELLVHLPPFLVKPAHQYTLIVGEECQITYSCGGPI* 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g1150 156 MobiDBLite consensus disorder prediction 58 106 - -
Lja1g1150 156 PANTHER - 1 156 - -
Lja1g1150 156 MobiDBLite consensus disorder prediction 82 97 - -
Lja1g1150 156 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN 1 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g1150 Lja-Chr1 11803989 11804459 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g1150 - - gmx:102669806 163.31
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g1150 1 11803989 11804459 Lja5g2006 5 26130269 26130718 PCT