Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g1981 ATGGAGTTGAGTAAAGTAACCCTAGAGATCTTCTCCAAACTGGAGCTGAAATGGCTCTCTCACTGCGATCAAGAACCACCACCAAACAAAACCCGCATTCTCAGCATTGACGGCGGAGGAACCACCGCCATTGTCGCCGGCGCCACCCTCATCCACCTTGAGGATCAGATCCGTCTCCAAACCTCCGATCCCGACGCGCAGATAGCAGATTTCTTCGAAATCATCGCCGGGACTGGCATTGGCGCCATCCTCGCCGCAATGATCACCGCCGCCGACGCCTTCGGCAGGCCTCTCTACACTGCCAGGGAAGCTGTACGCGTCCTCACCGAGAGAAGCTCTGAACTCTACAAACTCAAATCCGGCGGAGTATTCCGCCTCCGCCGGCGCCGGAGATTCTCCTCAACCAGCATGGATCACGTGTTGAAGCAAATCTTCCGGAGAAAGGAAGATGGAAGGTTGTTGACGTTGAAGGACACGTGTAAACCGCTGCTTATCCCTTGCTTTGACCTCAAGAGTTCTGCGCCGTTCGTGTTTTCCCGAGCCGACGCTTCCGAATCTCCCAGCTTCGACTTCGAGCTTTGGAAAGTGTGCCGCGCCACGTCAGCAACGCCCAGCCGTTTCCACCCGTTCAATCTCACCTCCGTCGACGGGAAAACCTCCTGCTCCGCCGTCGACGGCGGCCTGGTGATGAACAACCCGACGGCGGCGGCCGTCACGCATGTCCTCCACAACAAGCGCGATTTCCCGGCGGTGAACGGGGTGGAGGATCTCCTTGTTCTTTCCCTTGGGAACGGATCGTCGAATGCGAAGGCATGCGAGAACGAGAAGGAGAAGGAGAACCACCGCACGTGCTCCACGCCGTCGGTGGTTGGCATTGTGCTCGACGGAGTTTCCGAGACTGTTGACCAGATGTTAGGGAACGCTTTCTGCTGGAATCGTACTGACTACGTCAGAATCCAGGCGTTTGGTTTGGGAACTGAAGCGACAACGGAGGAGGAGGTGCTGAAAGAGAGGGGGTTGGAGTCGTTACCGTTTGGCGGGAAGCGGTTACTGACGGAGACAAACGGAAACAGAATCGATAGCTTCGTGCAACGACTTGTTGCGGCTACCGGAAAACCTAGCCTGCCGTCGAGTCCGTGCAAAGTTACCGCCGTGACATCTCTTGCTAACGGACGTTAG 1179 0.5674 MELSKVTLEIFSKLELKWLSHCDQEPPPNKTRILSIDGGGTTAIVAGATLIHLEDQIRLQTSDPDAQIADFFEIIAGTGIGAILAAMITAADAFGRPLYTAREAVRVLTERSSELYKLKSGGVFRLRRRRRFSSTSMDHVLKQIFRRKEDGRLLTLKDTCKPLLIPCFDLKSSAPFVFSRADASESPSFDFELWKVCRATSATPSRFHPFNLTSVDGKTSCSAVDGGLVMNNPTAAAVTHVLHNKRDFPAVNGVEDLLVLSLGNGSSNAKACENEKEKENHRTCSTPSVVGIVLDGVSETVDQMLGNAFCWNRTDYVRIQAFGLGTEATTEEEVLKERGLESLPFGGKRLLTETNGNRIDSFVQRLVAATGKPSLPSSPCKVTAVTSLANGR* 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g1981 392 Pfam Patatin-like phospholipase 34 237 IPR002641 GO:0006629
Lja5g1981 392 PANTHER PATATIN-LIKE PROTEIN 6 1 392 - -
Lja5g1981 392 ProSiteProfiles Patatin-like phospholipase (PNPLA) domain profile. 34 238 IPR002641 GO:0006629
Lja5g1981 392 SUPERFAMILY FabD/lysophospholipase-like 29 322 IPR016035 -
Lja5g1981 392 Gene3D Cytosolic phospholipase A2 catalytic domain 20 373 - -
Lja5g1981 392 CDD Pat17_PNPLA8_PNPLA9_like 33 321 - -
Lja5g1981 392 PANTHER INACTIVE PATATIN-LIKE PROTEIN 9-RELATED 1 392 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g1981 Lja-Chr5 25583659 25585686 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja5g1981 1 392 Acyl Lipid Metabolism Gene Families AT3G63200 69.898 0.0 549
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g1981 - - gmx:100795441 602.823
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g1981 5 25583659 25585686 Lja5g1981 5 25583659 25585686 ECH
Lja1g1124 1 11417358 11418994 Lja5g1981 5 25583659 25585686 PCT