Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g1977 ATGGACAGAACCAGAGAATCTAGAAGATCATCCATGACCATGGCGTCCTCCACCAATGGATTTCCCACGCGCCGACCTCGAAGTGTTCCTCTCAGAGACTCTTCCGAGGAAGGAGCGGTGGTGCAGGTGAGGGAAGCTTCGAGCAAGAAGGGAAGGAATCGAGAGAAGGATAGGGATTCGTCGAGTCGGAGCAAGAGGAGGAGAGGCTCTCACTCTCACAGGGAAGAAGGCGAACCAAGCACTGAAGATAGCGTCGGGAATGAACAAGACGACGACGTTCGAGACGCTGGGGTTTCTCGGATCCGTTCCTCGTCTTCCGCTTCTGATAAGAGCCACCACCGCCGGAATTTTACGGCGGCGAAGCCTCCCCCGCCCCGGCCGCCGTTCAAGGTAGTCGATGAGGTGATCGGCGTGGTAGTTCCCAGGAAGGCCCGTTCAGCTTCTTTGAAAAGGTTGCATGAGAGCTGGGTCTCCGGGGGCACCGGCGGTGGGGAGAATCGGACTTTCCGGCAACGGTCGAATTCTCCAGGAAGGCGAATTGTTGAACCGGCCTGGCCTTCTTCTTCGAATGCTTCTGTTAGGAAGAAGATGGTCAGCGCAATTTTTTCAATTTTGTTTTTTTGTGGGATTTGTTATTTTGAAGGACTAAGTTTTGAGATGTTTGTGAATGTGATGTTTAAGAAAGCGATTGAAGCTGAACCAGAGACATTGAAATTGGCTTCATCGGACATCGAGATTGAGATAGCCGAGCTTTTAACCGGTTTGAGGAGTTCAAAGGGCCACGAGTTTTCATCGCAGAAGCTGGAAGCAAGCATGGATCACCACGCCTTAGAGTCTTGTCACTCTAAGGATATTGCAGAGAAGAATAAATTGGAAGAGTTTAAAGATCCGAAGTATTCGTGTGAAGATTTATTAAGAATTCAGGGCCAGGAGCAACCAGCAGATGTGGATTGTCATGAAAATGGGTCATCAGCGGTTCCAAAAGAGGACATTGGGGAAGACAAAGTGAATCCAGGTGCTGGATTTGGTGGTGCTTATGTAGGTACTGGAAGATTTGATGCCCCTACAAATGAATCACAATCATGCTCCAAGTTGGATGCTGATAAACAGGATTCAGCTTCTACCAGAATGATGTGTGATGTTCCTGATGCCAATACCAAACGAGTTGGCAAGTTTGAGATAGATCTGATGGCTACTCCTCCTATGATGCTATCCCTAGAAGGGGATGATTTGTCAAAGAGTCAATTGACTTCAGAAACTAAAGCTTTGGCACCGGATGTGGAAATGAAGAGGATAGACAGTATTGAAGTTGAAGACAAGGCAGAAAGACCAGTTAACCAAGAGAAAACTCCGGAAGAAATTGAAGAGGCGAATATGATCGAGTTTAAGAAAAAATTGAATGTGCTAAAACATGATTTGGTGACGCCAAACAATGACAATGACATAATGACAAACAATAAATTGGAAAAGCAGGATAGGAATAAGGAACAGCCAAGTATATCGTCAAATCCCAAAGTGCAGAAAATTGATCATTCTAGTTCAGTGCCTTTGCCAGCTGGTGTATCAGGACGGCCAAGCAATCTCACTTCTATTGGATGCAAGCCACTTTTGCAGAAAGTTGGGGAAACAGATAAAACCAAAGGAGGATCATCGAAATCCCCACAGGGTGTGAATTCTGTTCTCTCTCAACCAAAACGAAAGAGATGTGCAACCCATTATTACATTGCTCGTAACATCTTACACCAGCAGTATACAAAGATGAGCCCCCCTTTACCAGCTGCTATTGGCCCAGGTTCTCTGTGTGGCATTAAACCCAACAATGTCGACTGTGTACCCTCTTCTAGCAAGCAATCTCAAAAACACTTTCCAGGTGTAAACCAAAAAGGTGCACAAGAGAAAGTGTTGGTTGCTACAAGCGATCCTAGTCTTGCTGCATTTAGAAGTTCTAATAATGCCAACCCAATGGATTCAACACACATGCAGCTTGTGCTCCAACAAGGTCCATATCCTGGCTCAATTGGTACTCTAGTGGGTCCTGCTTTTGTATTTGGTCCGGGCCAGCATCAAGCATCAGTAGCAGCACCTACTAATCAGGCAGGCGGTGTGAATTTTCCCAGCAGTGCTTCCTCTTATAATAGGTCTCATAGTTCGGTTGCCGGATCTCTTGATACCTCCTCTACTCTGCCTGCAGCTGCTGCTGCAATGAGCTGTAGCTACCCAAAATTTTCAGCCAACGATTCTCCGTATGTGACTATAGTTTCCAATAATGGGTATTCATTCCCCTATTCAACTGCTGTGATCAGAGGTGTAAGTCCTGGTGGGCCTTTCTACTCTTCTCAAATACTCCATCCTCTTCAGTATCCACAACAGCACCCTCACTCAAAAGTACTGGTTCAACCAAGTTATCCTAATGCAAGCATATCAAGTATTTCATCATCTCATAAGCAGTCACAGGGTGCACAAGGTAATGGTAATAATATCATGACCTCTAAAACAAGGGAACAGCCGTCACAAAAGCAAAGAACTCCCCAGTCTCATCCTCGGAAGCATGAGGTTGTTGTGGGGGGCGAGAACGTACCATCTGTTGCTAATCGAACATCTTATGCACAGAAGAATGTGCATGGGCAGAACTTCACAATTCCAGTTCAGCCTATGAACCTTTCTTTTAAGCCATCTGCAACATCAGATAAAGCTGGTGGCAACAGTGGGATTTTTGCTGACAAGCAGCAGAAACAACAGGCTTCAAAGGGGGGAGTTGAAATTGTACCATCTCAAGCGTTTGCAGTATCGTTTGCTACATTTAATGGGACCAGTGTTCCTTCAAGCCTTAACTTCTCATCCATGGCACAGAACCCACAGATACTCCACAGTCTGCCTGATATTGCGTACCAAGGATATCCAGCTGCAAGTACACCTTATACTACTCAGCAGAAGACTTGTTCAATTACTGGAGATAAGAGTGGAGGTAATTCCTCCCAACAAGATGATGTTAAGAAGATCACTCATGGAAAGTCACCAACCATTGGGCCAACTACTCTTGTCTTTGACAATTCATCAAAGAATCAAAACTTTGTGATGAGTAGTACGAGTGGAAACTGGCCTAGTGGCGCCATTGCTTCAACTGCGATAATAAACATGCCTTTTTCCGGTAATGCTTCAGGTTCTCAACAGCAGCCGCAGTCGCTTCAGCTTCAGAACATGCAACAGCCGCGACCTGCCATGTCTACTCGAAAGAAAGCATTATCTGCCACAAAGTTTGCAATGGACACCCCTGTTTTGTCACAAAGCCTTGCTCAGTGCAAAAGTTCTAATCAAAATTCTCTCTCTAAGACCTTGGGAAGAACCACAGCTTCTCATGTTCATCACAAGTCTATTATAACATCTAGTGCTCCAACCGTCAAAAGTTTACCTCAGGAGAAAGGAAGAGACTCAAAGGGTCATAAGCAAATTTCTTTTGGGGGAAATTACACCACTTCGTTGCCAACCCAAGGAGCAAAGGCAACAACCACTCAATAA 3516 0.4548 MDRTRESRRSSMTMASSTNGFPTRRPRSVPLRDSSEEGAVVQVREASSKKGRNREKDRDSSSRSKRRRGSHSHREEGEPSTEDSVGNEQDDDVRDAGVSRIRSSSSASDKSHHRRNFTAAKPPPPRPPFKVVDEVIGVVVPRKARSASLKRLHESWVSGGTGGGENRTFRQRSNSPGRRIVEPAWPSSSNASVRKKMVSAIFSILFFCGICYFEGLSFEMFVNVMFKKAIEAEPETLKLASSDIEIEIAELLTGLRSSKGHEFSSQKLEASMDHHALESCHSKDIAEKNKLEEFKDPKYSCEDLLRIQGQEQPADVDCHENGSSAVPKEDIGEDKVNPGAGFGGAYVGTGRFDAPTNESQSCSKLDADKQDSASTRMMCDVPDANTKRVGKFEIDLMATPPMMLSLEGDDLSKSQLTSETKALAPDVEMKRIDSIEVEDKAERPVNQEKTPEEIEEANMIEFKKKLNVLKHDLVTPNNDNDIMTNNKLEKQDRNKEQPSISSNPKVQKIDHSSSVPLPAGVSGRPSNLTSIGCKPLLQKVGETDKTKGGSSKSPQGVNSVLSQPKRKRCATHYYIARNILHQQYTKMSPPLPAAIGPGSLCGIKPNNVDCVPSSSKQSQKHFPGVNQKGAQEKVLVATSDPSLAAFRSSNNANPMDSTHMQLVLQQGPYPGSIGTLVGPAFVFGPGQHQASVAAPTNQAGGVNFPSSASSYNRSHSSVAGSLDTSSTLPAAAAAMSCSYPKFSANDSPYVTIVSNNGYSFPYSTAVIRGVSPGGPFYSSQILHPLQYPQQHPHSKVLVQPSYPNASISSISSSHKQSQGAQGNGNNIMTSKTREQPSQKQRTPQSHPRKHEVVVGGENVPSVANRTSYAQKNVHGQNFTIPVQPMNLSFKPSATSDKAGGNSGIFADKQQKQQASKGGVEIVPSQAFAVSFATFNGTSVPSSLNFSSMAQNPQILHSLPDIAYQGYPAASTPYTTQQKTCSITGDKSGGNSSQQDDVKKITHGKSPTIGPTTLVFDNSSKNQNFVMSSTSGNWPSGAIASTAIINMPFSGNASGSQQQPQSLQLQNMQQPRPAMSTRKKALSATKFAMDTPVLSQSLAQCKSSNQNSLSKTLGRTTASHVHHKSIITSSAPTVKSLPQEKGRDSKGHKQISFGGNYTTSLPTQGAKATTTQ* 1172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g1977 1171 MobiDBLite consensus disorder prediction 1150 1171 - -
Lja5g1977 1171 MobiDBLite consensus disorder prediction 161 175 - -
Lja5g1977 1171 MobiDBLite consensus disorder prediction 1114 1135 - -
Lja5g1977 1171 MobiDBLite consensus disorder prediction 519 533 - -
Lja5g1977 1171 MobiDBLite consensus disorder prediction 474 564 - -
Lja5g1977 1171 MobiDBLite consensus disorder prediction 805 842 - -
Lja5g1977 1171 MobiDBLite consensus disorder prediction 547 564 - -
Lja5g1977 1171 MobiDBLite consensus disorder prediction 155 186 - -
Lja5g1977 1171 PANTHER PROTEIN TIME FOR COFFEE 1 1169 IPR039317 GO:0042752
Lja5g1977 1171 PANTHER TIC-LIKE PROTEIN 1 1169 - -
Lja5g1977 1171 MobiDBLite consensus disorder prediction 805 853 - -
Lja5g1977 1171 MobiDBLite consensus disorder prediction 47 64 - -
Lja5g1977 1171 MobiDBLite consensus disorder prediction 10 24 - -
Lja5g1977 1171 MobiDBLite consensus disorder prediction 1114 1171 - -
Lja5g1977 1171 MobiDBLite consensus disorder prediction 1 130 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g1977 Lja-Chr5 25478416 25483746 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g1977 - - lja:Lj5g3v0976250.3 1840.08
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g1977 5 25478416 25483746 Lja5g1977 5 25478416 25483746 ECH
Lja1g1123 1 11403167 11408187 Lja5g1977 5 25478416 25483746 PCT