Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g1974 ATGAGGGAGTTTCCATCTTGTTTTGGAGAAAATGGTGTTCAGGTAGCTGATTCATCCTCATCAAGTAGTACCACAAGAGGAGCTCAGAATGCAGTTACTTGTGTCTACCACAGCAAATTAAGAGGCCGTTCTTGCTTGATTACAGTCTCATGGACCAAAACTCTGATGGGTCAAGGCATGAGTGTGGGAATTGATGACCTTTCCCGTATTTGCCTCTGCAAGGTTGAAATAAAGCCATGGTTGTTCTTAAAGAGAAAAGGGTCAAAGAGTTTAGAGGTCCAATCTGGTAAAATTGATATCTTTTGGGACTTGAGTTCTGCTAAATTTGGTTCTGGACCAGAGCCATTAGAGGGGTTTTACTTAGCTGCTGTGTTCAATCAGGAAATGGTTCTGCTCCTTGGGGATCTGAAAAATGAGGCATGCAAGAAGGTTCACAGTGATTGTGTTTTTGCTCACTCTGGTGCCAGTTTTATTGCAAAGAGAGAGCACATTTTTGGGAAGAAATTTTATGGTGCAAAGGCTCAATTTTTTGATAAGGGGAAAGTACATGATGTCACAATTGAGTGTGACACTGTTGGGGTTAATGATCCATGTCTTGTGATACGAATTGATAGCAAGACAGTGATGCAGGTGAAGAGGCTGAAATGGAAATTCAGAGGGAATCACACTGTTTTGGTGGATGGGGTTCCTGTTGAAGTGTTTTGGGATGTGCATAATTGGCTTTTTGGAAATGCTTTGGGCAATGCTGTATTTTTGTTCCAAACTTGTGTTCCAACTGAGAAGATGTGTGAAGAAAGCCAATCAGTTTCGGATCCAGCTTCACTAACACAGGGTTCTTCTCAGCAGTTTAGGGATTCCCAGTTGCAAGGTTTTGGATTCTCTTTGGTTCTGTATGCTTGGAAGAACGAGTAG 912 0.42 MREFPSCFGENGVQVADSSSSSSTTRGAQNAVTCVYHSKLRGRSCLITVSWTKTLMGQGMSVGIDDLSRICLCKVEIKPWLFLKRKGSKSLEVQSGKIDIFWDLSSAKFGSGPEPLEGFYLAAVFNQEMVLLLGDLKNEACKKVHSDCVFAHSGASFIAKREHIFGKKFYGAKAQFFDKGKVHDVTIECDTVGVNDPCLVIRIDSKTVMQVKRLKWKFRGNHTVLVDGVPVEVFWDVHNWLFGNALGNAVFLFQTCVPTEKMCEESQSVSDPASLTQGSSQQFRDSQLQGFGFSLVLYAWKNE* 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g1974 303 MobiDBLite consensus disorder prediction 1 25 - -
Lja5g1974 303 PANTHER EXPRESSED PROTEIN 1 302 IPR008586 -
Lja5g1974 303 Pfam Plant protein of unknown function (DUF868) 28 301 IPR008586 -
Lja5g1974 303 PANTHER PLANT/T24G3-80 PROTEIN 1 302 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g1974 Lja-Chr5 25437684 25438991 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja5g1974 1 303 EF-hand Containing Proteins AT5G28150 61.184 1.01e-128 366
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g1974 - - gmx:100793503 520.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g1974 5 25437684 25438991 Lja5g1974 5 25437684 25438991 ECH
Lja1g1115 1 11325924 11327192 Lja5g1974 5 25437684 25438991 PCT