Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g1115 ATGAAGGAGTTTCCATCTTGTTTTGGAGAAAATGGTGTTCAGGTTGTGGATTCATCTTCTTCAAGTACCACAAGAGGAGCTCAAAATGTGGTTACTTGTATCTATCAGTGTAAATTACAAGGTCGTTCATGCTTGATCACAGTCTCTTGGACCAAATATCTGATGGGTCAAGGGTTAAGTGTGGGAATAGATGAGTTGGGAAATCATTGCCTCTGCAAGGTTGACATAAAGCCATGGTTGTTCCAAAGAAGAAAAGGGTCTAAGAATTTGGGAGTTGAATATGGTAAAATTGATATACTTTGGGATTTGAGTTCTGCTAAATTTGGTTCTGGGCCAGAACCATTGGAGGGATTTTATGTAGCAGTTTTGTTCAACAAAGAGATGGTGTTACTCCTAGGTGATCTGAAAAAGGAGGCATGCAAGAAGATTGAGCATCACAGGGTTAATGCTCACTTTGATCATGCTATTTTTCTTGCAAAGAGAGAACACATTTTTGGTAAGAAATTTTACAGTGCAAAGGCTCAATTTTGTGACAAGGGTCAAGTGCATGATGTGAGAATTGAGTGTGACACTCTTAATGATCCTTGTCTTGTGATTCGAATTGATAGCAGGACAGTGATGCAGGTGAAGCAACTCAATTGGAAGTTCAGGGGGAATCACACCATTTTGGTGGATGGAATTCCAGTGGAAGTGTTTTGGGATATTCATAATTGGCTCTTTGGAAATACTATAGGAAATGCAGTTTTCATGTTCCAAACCTGCATTTCAACTGAGAAGGGCCAATCTGCTTCTGATCCTTCTGTTCTGAAATGGGCTTATTCTCATGAGTTCAGGGATTCCCAGTTGCAAGGTCTTGGATTCTCTCTCATTTTGTATGCTTGGAAAAATGAATAG 894 0.3971 MKEFPSCFGENGVQVVDSSSSSTTRGAQNVVTCIYQCKLQGRSCLITVSWTKYLMGQGLSVGIDELGNHCLCKVDIKPWLFQRRKGSKNLGVEYGKIDILWDLSSAKFGSGPEPLEGFYVAVLFNKEMVLLLGDLKKEACKKIEHHRVNAHFDHAIFLAKREHIFGKKFYSAKAQFCDKGQVHDVRIECDTLNDPCLVIRIDSRTVMQVKQLNWKFRGNHTILVDGIPVEVFWDIHNWLFGNTIGNAVFMFQTCISTEKGQSASDPSVLKWAYSHEFRDSQLQGLGFSLILYAWKNE* 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g1115 297 Pfam Plant protein of unknown function (DUF868) 27 295 IPR008586 -
Lja1g1115 297 PANTHER EXPRESSED PROTEIN 1 296 IPR008586 -
Lja1g1115 297 PANTHER PLANT/T24G3-80 PROTEIN 1 296 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g1115 Lja-Chr1 11325924 11327192 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g1115 1 297 EF-hand Containing Proteins AT5G28150 60.333 1.59e-123 353
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g1115 - - gmx:100786850 510.375
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g1115 1 11325924 11327192 Lja1g1115 1 11325924 11327192 ECH
Lja1g1115 1 11325924 11327192 Lja5g1974 5 25437684 25438991 PCT