Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g1963 ATGGAGACCCTTGTTGTTGTTGAGCAGCATAGGAACCAATGCTATAGCAGATCCAAGCCACAGGGCCATGCTCAATTTGGCTCTTCACCTTCCAGGGACTTTATAGGATTCAATTGCAGGAATTTTCAGAAATCTCATGGTTCCCCTAAAACACCACCCCATGTAAATGATAACAAAATTTATGGGAAGAAAACTACTACTAAGAGCAGCCCAATTCCTATCAATGACAAAGCTTGTAGAAAGGATACAACTTTGAGTTTTTCTGAAGATGTGACTGGTGGAAATGGGAGCTTTTTGCTCTCTGAGTTATGGGCTGGACCTACCTACTCAAATTCACCCCCTCCAAGTTCATTGCCAATTCCCAAGTTTTCTGTCCAGCCAAAGAGGACTGTGTCTCTGAATCTTCCTGGTTCCTCCCCTGAGGTTGAAGTAAGTCCGGTGGCTAAGTCGGCTCCCCCTTCGCCGGGCAGGGAGCATGTGCCTTCTACAAGAGGTTTCTTTGTTAATGCTGATTCTGCTACTGAGACGCTGTGTCGCATTCTCAATCTTAACATCATTGATGAGTGA 567 0.4515 METLVVVEQHRNQCYSRSKPQGHAQFGSSPSRDFIGFNCRNFQKSHGSPKTPPHVNDNKIYGKKTTTKSSPIPINDKACRKDTTLSFSEDVTGGNGSFLLSELWAGPTYSNSPPPSSLPIPKFSVQPKRTVSLNLPGSSPEVEVSPVAKSAPPSPGREHVPSTRGFFVNADSATETLCRILNLNIIDE* 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g1963 188 Pfam Proline-rich nuclear receptor coactivator motif 104 123 - -
Lja5g1963 188 MobiDBLite consensus disorder prediction 134 162 - -
Lja5g1963 188 PANTHER - 1 188 - -
Lja5g1963 188 PANTHER BNAA03G57290D PROTEIN 1 188 - -
Lja5g1963 188 MobiDBLite consensus disorder prediction 45 75 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g1963 Lja-Chr5 25087163 25088252 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g1963 - - gmx:100791409 224.942
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g1963 5 25087163 25088252 Lja5g1963 5 25087163 25088252 ECH
Lja1g1109 1 11062893 11063501 Lja5g1963 5 25087163 25088252 PCT