Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g1109 ATGGAGATGCTTGTTGTGGCACAGCACAGGTCTAAGTCTCAAGGCCATGGTGGATTTGGGTATCCTTCACCTTCAAGGCATTTCAGAGGGATGAATTGTAGGGCTTTTCAAACTGGATCTGGTATTCTACCAACTCCATTGAAATCTTGCACCACACCTGAACCTAAAAAAACATCCTCAGCTTCATCAAAAACAGTTTTAACTACTCCGAACTCGAACCCGCGGACCAAAACCCGTTGCAAAACTACCCCCGGCAGTGCCCCGGTTGCTATCAAAGTGAAAGGCTGTAAGAAGGAGAGAATTTTCTGTGAGAATGTTTGTGATAGGAGCTTTTTGCTATCTGAACTTTGGGCTGGACCTACTTACTCAAATTCACCGCCACCGAGTTCCTTGCCTATCCCGAAATTCTCTGTTAAACCGAAGAGGACTGTTTCCCTTGATCTGCCTAGTTCCTGCCCTGAGATTGAAATGCACCTAATGGCCAAGTCTGCACCTTGCTCCCCTCGCCGGGAGTATTCTCCTTCTGCCAGTGATTTCCTTGCCAATGCTGATTCTGCGACCAAGACTTTGCGTCGCATTCTCAACCTTGACTTGGATGATGATGAATGA 609 0.4696 MEMLVVAQHRSKSQGHGGFGYPSPSRHFRGMNCRAFQTGSGILPTPLKSCTTPEPKKTSSASSKTVLTTPNSNPRTKTRCKTTPGSAPVAIKVKGCKKERIFCENVCDRSFLLSELWAGPTYSNSPPPSSLPIPKFSVKPKRTVSLDLPSSCPEIEMHLMAKSAPCSPRREYSPSASDFLANADSATKTLRRILNLDLDDDE* 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g1109 202 PANTHER - 1 201 - -
Lja1g1109 202 MobiDBLite consensus disorder prediction 44 84 - -
Lja1g1109 202 Pfam Proline-rich nuclear receptor coactivator motif 117 136 - -
Lja1g1109 202 MobiDBLite consensus disorder prediction 44 83 - -
Lja1g1109 202 PANTHER BNAA03G57290D PROTEIN 1 201 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g1109 Lja-Chr1 11062893 11063501 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g1109 - - adu:107493014 215.312
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g1109 1 11062893 11063501 Lja1g1109 1 11062893 11063501 ECH
Lja1g1109 1 11062893 11063501 Lja5g1963 5 25087163 25088252 PCT