Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g1906 ATGAAGCAAATTCGCCACCGCCGGAGGATTCTCATCCTTTGTTTGCTCTCTCTCTCCGTCGTTGCTCCTCTCGTTTTCGTCTCTCTAGGGAGAAGTGAATTTCTTGAAGAATTGTATCGTGTTACATACAGGACAGGTAGTTTGAAAATAAATGCTGTAGAACAGGAAGGTTCTGAAGAATTAGAAGAGCCAAATGAAGTTGTTTATATAGAGAAAGATGTTGTTTCAACAATTACTTACGATTCAGGGAAGAATAACGAGTCTAGGGAATCTAGAATTGCAGAGTTCAGAAGTATCCCTTTGGAAAGAAATGTTTCAGGATTGGGGAATGGTAATAAACAACACAGAGGAGCTCAGCAGAAAAATTTATCCTCCAATACTGAAGATACAAATACACATGCTTATTCACAGGAAATGTCAAAGGAGAACATTAAAGGGACACATATGCAATCTGGTCGAAAAGCCGGCCATCATCACATTTTAAACTCTCGCTCTAATAAAGTGAAAAATCAGAAGGTTCTAGAGATTAAGGATCAAATTCTTACTGCTAAAGCATACTTGAAATTTGCACCACCAAACAGCAACTCACGCTTGAAGGAGCTGGAGCTACAAGTGAAGGAGTTGGAAATAGCAGTTGGAGAAGCCACCCAGGATTCAGATTTGTCAATGAGTGTTTTGCAGAAAATGAGACACATGGAGGCTTCACTGTCTAAAGTTAGCCGTGCTTTCCCTGACTGCTCTACTATGGCTTCTAAGCTTAATGCAATGAAGCGTAACACTGAAGTGCAAGTCCGGTCTCTACGAAGTCAAGCAACATATCTTGTTAATCTTGCTGCAAGGTCTGCCCCAAAAAGCATTCACTGTCTTTCTATGCGGCTGACTACAGAATACTTTGCCCTGAGGCCTGAGGAGAGAAAGCTTCCAAATGAACATAAGATTCATCATCCTGAACTTTATCATTACGCTGTGTTCTCTGATAATGTTCTGGCATGTGCAGTGGTTGTCAATTCTACTGTCTCTTCTGCCAAGGAACAGGAAAAACTTGTTTTCCATATTGTGACCAATTCACTCAGCTTACCAGTGATCTCAATGTGGTTTTTATTAAACCCTCCTGGCAAAGCCACAGTCCACATACAGAGCATAGACAACTATGCATGGTCTTCCAAGTACAATATCTCTGACAGCAGTCCCAGATATGCTTCTGAATCGAACTACCTGCTTTTCTACCTGCCAGACATTTTTCCTGCCCTAAACAAGATTGTGCTCTTTGATCATGATGTGGTGGTGCAGCAGGATCTCAGTGGACTATGGAATGCCGATATGAAAGGAAACGTAATTGGAGCAGTTGGAACTTGTGAGGAAGGCAAGCCCTCATTTCTTAGGATTGATACGTTCATAAACTTCTCAGATCCATCAATTGGAGAGAAGTTTGATGTCAATGCTTGCAGTTGGGCATTTGGGGTGAACTTGTTTGATTTGCAACAGTGGAGGAGACATAATTTAATCGCAGTCTATCACAAATATTTGCAAATGGGTTCTGAGAAGCCATTGTGGAATTGGTACACTGGACGTGTGCCTTTAGGTTGGCTTACATTCTATAACAATACAGAGTTGTTGGATAGAAGATGGCAGATTCTTGGGCTTGGTCATTACTCTGGTATCGGTCGAAATGAGATTGAGGAAGCTGCTGTTATACACTATGATGGCATTAGGAAGCCATGGTTGGATATTGCAATGGGCAGATACAAAAGTTACTGGACCAAATTTTTAAATTTTGACCATCCGTTTTTGCAACAGTGCAATCTCCAGGAATAG 1815 0.4127 MKQIRHRRRILILCLLSLSVVAPLVFVSLGRSEFLEELYRVTYRTGSLKINAVEQEGSEELEEPNEVVYIEKDVVSTITYDSGKNNESRESRIAEFRSIPLERNVSGLGNGNKQHRGAQQKNLSSNTEDTNTHAYSQEMSKENIKGTHMQSGRKAGHHHILNSRSNKVKNQKVLEIKDQILTAKAYLKFAPPNSNSRLKELELQVKELEIAVGEATQDSDLSMSVLQKMRHMEASLSKVSRAFPDCSTMASKLNAMKRNTEVQVRSLRSQATYLVNLAARSAPKSIHCLSMRLTTEYFALRPEERKLPNEHKIHHPELYHYAVFSDNVLACAVVVNSTVSSAKEQEKLVFHIVTNSLSLPVISMWFLLNPPGKATVHIQSIDNYAWSSKYNISDSSPRYASESNYLLFYLPDIFPALNKIVLFDHDVVVQQDLSGLWNADMKGNVIGAVGTCEEGKPSFLRIDTFINFSDPSIGEKFDVNACSWAFGVNLFDLQQWRRHNLIAVYHKYLQMGSEKPLWNWYTGRVPLGWLTFYNNTELLDRRWQILGLGHYSGIGRNEIEEAAVIHYDGIRKPWLDIAMGRYKSYWTKFLNFDHPFLQQCNLQE* 605
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g1906 604 MobiDBLite consensus disorder prediction 105 135 - -
Lja5g1906 604 MobiDBLite consensus disorder prediction 147 167 - -
Lja5g1906 604 Coils Coil 198 218 - -
Lja5g1906 604 MobiDBLite consensus disorder prediction 151 165 - -
Lja5g1906 604 MobiDBLite consensus disorder prediction 104 135 - -
Lja5g1906 604 PANTHER GALACTURONOSYLTRANSFERASE 4-RELATED 1 603 IPR029993 GO:0047262
Lja5g1906 604 Pfam Glycosyl transferase family 8 288 578 IPR002495 GO:0016757
Lja5g1906 604 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 321 594 IPR029044 -
Lja5g1906 604 SUPERFAMILY Nucleotide-diphospho-sugar transferases 319 601 IPR029044 -
Lja5g1906 604 PANTHER HEXOSYLTRANSFERASE 1 603 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g1906 Lja-Chr5 23420962 23432748 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja5g1906 1 603 Glycosyltransferase AT1G06780 46.288 0.0 551
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g1906 K13648 - gmx:100819255 806.979
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g1906 5 23420962 23432748 Lja5g1906 5 23420962 23432748 ECH
Lja1g1068 1 10653986 10659735 Lja5g1906 5 23420962 23432748 PCT