Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g1068 ATGAGAGAGAGAGAGAGACGCAGAAAATTTAACAAGGCGAGTCGTACATGGAAGAAGAACCTGCTTCTCTGTCTTCTCTTACTTTCTCTCTCTAAAAAGCAGCGAATAACTGAAACCCTAACTTTGCTGTTTCAATTCGTTTCGGTTACTTGTGCTCGACGCATTGGATTCCTTCTCCGTGATCTGAATCCGTCAAATGTGATCGGAGTTCCATCGATGAGGCAATCTCGTCGGTGGCAGAGGATTTTCATCCTCTCTCTGCTCTTCCTCTCCGTCGTTGCTCCTCTCATTTTCCTCTCTCACCGCCTTCAACTTCTCACTCCTTCTCATGGACCAAGAGAGTTTTTCGATGATTTATCCACTGTTACATACAGGACAGATCCTGTACTGTTAAATGCTATAGAACAGGAAGGGGCTGAAGAAATACAAGAGCCTAAGGAAGTTGTTTATAAGGAAATAGACTTTGATTCAGCAGTGAGTTACAGTGGTTCCGGAAAGAATAATAGTTCTGAGGAATCTAGAATCGAGGGGTTCAGAAGTAGCCTCTTGGAAAGAAATGTTTCAGGATTCGACGATGACAAAAGACAAGACCAGGAAGCTCGGCAAAATGGATCATCCTCGGTTGATGGAGATAAGAAGAAATTTAATACAACACTTACACACAACCAGAATACACAAACTCACTCTCAAAGAATGACAGAAAAGAAATCCAGTCTGACAGCAACCCGAAATCATCATACTTCACGCTCTCAATCTCAGAGAGTGACATATCAGAAGGTGGGGGAGATTAAGGATCAAATAATTAGAGCCAGAGCATACTTGGGATTTTTCCCTCCAAATAGCAATTCACACTTGTTAAAGGAATTGAAGCTGAGAATTAAAGAGATGGAACGTGCAGTTCGAGACGCTATCAAGGATTCAGATCTGTCAAGGAGTGCTTTGCAGAAAATGAGACACATGGAGGCTTCACTGTCTAAAGCCAACCGTGCTTTCCCAGACTGCACTGCTATGGCTACTAAGCTCCGTGCAATGAATCATAAGGCTGAAGAGCAAGTTCGTTCTCAGCAACGTGGAGTAACACATCTTGTTCATCTTGCTGCAAGGACCACTCCAAAAGGTCTTCACTGTCTTTCTATGCAGCTAACTTCTGATTTCTTTGCCCTGAGACCAGAGGACAGGAAGCTGCCAGATGAAAATAAGATTCATAATCCCAAACATTATCATTATGCTGTCTTCTCTGACAATATTCTTGCATGTGCAGTGGTTGTTAACTCCACAGTCTCTAATGCCAAGAAACAGGAAAAACTTGTTTTCCATGTAGTGACCAATTCACTCAACTTTCCGGCAATCTCCATGTGGTTCTTATTAAACCCTCCGGGTAAAGCCACAGTCCACATACAGAACATTGACAACTTTGAATGGTTGTCCAAGTACAATACATTCAAGAAAAATAATTCCAGTGATCCAAGATATACTTCTGAATTGAACTACCTGCGTTTCTATCTGCCAGATATCTTCCCTACTCTAAATAAGATTCTGCTCTTTGATCACGATGTTGTGGTGCAAAAAGATCTCAGTGAACTATGGAATGTTAATATGAATGGAAAAGTAATTGCAGGTGTTGGGACTTGCCAGAAAGGTGAAACTTCATTTCACAGGATGGATATGTTCATAAACTTCTCAGATCCATTCATTGCAAAGAGGTTTGATGTCAATGCTTGTACATGGGCATTTGGGATGAACTTGTTTGATTTGCAGCAGTGGAAGAGACATGATTTAACTGCGGTCTATCACAAATATTTGGAAATGGGAGCCAAGATGCCATTGTTGAACAGTGGAAGTCTGCCTCTAGGCTGGCTCACTTTCTATGAGAAGACTCTGATTTTGGACAGACGGTGGCACATTCTTGGCCTTGGTTACGACTCCATAGTCGATACAAATGAGATTGAGCGTGCTGCCGTTATTCATTACGATGGAATCAGGAAGCCTTGGTTGGATATTGCGGTGGGCAGATATAAGAGTTACTGGACCAAATTCATGAAGTTTGACCTCCCCATTTTGCAGCGTTGCAATCTACAGGCGTAG 2085 0.4221 MRERERRRKFNKASRTWKKNLLLCLLLLSLSKKQRITETLTLLFQFVSVTCARRIGFLLRDLNPSNVIGVPSMRQSRRWQRIFILSLLFLSVVAPLIFLSHRLQLLTPSHGPREFFDDLSTVTYRTDPVLLNAIEQEGAEEIQEPKEVVYKEIDFDSAVSYSGSGKNNSSEESRIEGFRSSLLERNVSGFDDDKRQDQEARQNGSSSVDGDKKKFNTTLTHNQNTQTHSQRMTEKKSSLTATRNHHTSRSQSQRVTYQKVGEIKDQIIRARAYLGFFPPNSNSHLLKELKLRIKEMERAVRDAIKDSDLSRSALQKMRHMEASLSKANRAFPDCTAMATKLRAMNHKAEEQVRSQQRGVTHLVHLAARTTPKGLHCLSMQLTSDFFALRPEDRKLPDENKIHNPKHYHYAVFSDNILACAVVVNSTVSNAKKQEKLVFHVVTNSLNFPAISMWFLLNPPGKATVHIQNIDNFEWLSKYNTFKKNNSSDPRYTSELNYLRFYLPDIFPTLNKILLFDHDVVVQKDLSELWNVNMNGKVIAGVGTCQKGETSFHRMDMFINFSDPFIAKRFDVNACTWAFGMNLFDLQQWKRHDLTAVYHKYLEMGAKMPLLNSGSLPLGWLTFYEKTLILDRRWHILGLGYDSIVDTNEIERAAVIHYDGIRKPWLDIAVGRYKSYWTKFMKFDLPILQRCNLQA* 695
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g1068 694 PANTHER GALACTURONOSYLTRANSFERASE 4-RELATED 73 693 IPR029993 GO:0047262
Lja1g1068 694 MobiDBLite consensus disorder prediction 187 256 - -
Lja1g1068 694 PANTHER HEXOSYLTRANSFERASE 73 693 - -
Lja1g1068 694 SUPERFAMILY Nucleotide-diphospho-sugar transferases 407 691 IPR029044 -
Lja1g1068 694 MobiDBLite consensus disorder prediction 201 256 - -
Lja1g1068 694 Pfam Glycosyl transferase family 8 376 668 IPR002495 GO:0016757
Lja1g1068 694 Coils Coil 286 306 - -
Lja1g1068 694 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 398 683 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g1068 Lja-Chr1 10653986 10659735 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g1068 73 694 Glycosyltransferase AT1G06780 48.742 0.0 610
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g1068 K13648 - gmx:100811619 959.518
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g1068 1 10653986 10659735 Lja5g1906 5 23420962 23432748 PCT