Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g1905 ATGTCTTCACCCCGTTACAGTTCCCTCCCTTCAACTTCAACCTCACCTTCCCACTACCCCTTCTCACGCGCCACCAACGCCTCCAATTTCCCCACGCGCCGCCCCTGGGAAGAATTCTTCACCCTCCACTCCCTCACCCGCCCTTACTCCCTCGGCGAAGCCTCCCTCCGCGTGAAGCACAACCTCCGCCACTTCCTCGGCAACTACACCATGGTCCTCCTCTTCATCCTCTTCGTCTCCCTCATCTGGCACCCCGTCTCCATCATCGTCTTCCTCGCCGTCTTCCTCGCCTGGTTCTTCCTCTTCTTCTTCCGCGACCGCCCTGTCGTTGTCCTCTCCCGCACCGTCGATTACCGTTTCATCCTCGCCGCGCTCTGGGTTGTTACCGTTGTTGCGCTCGTTCTCACCAGAGTTTGGCTCAATGTCCTCGTGTCGCTTCTCGTCGGTGCCGCGGTGGTTGGGTTGCACGCGGTTTTCCGGAGTACTGAGGATTTGTATGTTGATGAGTTGGATGTTTCTGATGGAGGTTTGCTCTCGGTTGTTGGTGGTAGTCCCACCAAGAGAACAGGGTACAATAGAAATTTAGTTTAG 591 0.5668 MSSPRYSSLPSTSTSPSHYPFSRATNASNFPTRRPWEEFFTLHSLTRPYSLGEASLRVKHNLRHFLGNYTMVLLFILFVSLIWHPVSIIVFLAVFLAWFFLFFFRDRPVVVLSRTVDYRFILAALWVVTVVALVLTRVWLNVLVSLLVGAAVVGLHAVFRSTEDLYVDELDVSDGGLLSVVGGSPTKRTGYNRNLV* 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g1905 196 MobiDBLite consensus disorder prediction 1 20 - -
Lja5g1905 196 Pfam PRA1 family protein 29 169 IPR004895 -
Lja5g1905 196 PANTHER PRENYLATED RAB ACCEPTOR 1-RELATED 18 186 IPR004895 -
Lja5g1905 196 PANTHER PRA1 FAMILY PROTEIN 18 186 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g1905 Lja-Chr5 23339468 23340461 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g1905 K20359 - gmx:100815700 192.586
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g1905 5 23339468 23340461 Lja5g1566 5 16584939 16586002 ECH
Lja5g1905 5 23339468 23340461 Lja5g1905 5 23339468 23340461 ECH
Lja1g1064 1 10630945 10632192 Lja5g1905 5 23339468 23340461 PCT