Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g1391 ATGGAACTCCTCCAACCACCTCCCACCTTCGACAGCACCTGCTCCACCCCTTACGTCAGCGCCCCATCCAGCCCCGCCGGCTTCTACTACAGCGCCCCCGCTAGTCCAATGCACTTCGCCGCCATCACCTCCTCCTCCGAGTTCGAGTTCTCCGCCAGGTTTGGCTCCGCCGCCTTAGCTTCTTCTGGTGCCATGACCTCCGCTGACGAGCTTTTCCTCAACGGCCAGATCCGCCCCATGAAGCTCTCCACGCACCTCGAACGGCCACAACTCCTCGCTCCCTTGCTGGATCTGGAAGGTGAGGAGGAAGATGAAGAGGTTGTTGTCAGAGGTAGAGATCTGAGGCTCAGAGACAAGTCTGTGAGGAGAAGAACCAGATCTATGTCTCCTCTCAGAAACGACACGCCTCTTGAGTGGGCAGAGAGTGAAGAACCTGAAGACAAACCAAATCAAACCAACGACAACAACGTTGACAGCAACAATGGCTGTTCCTCTGAGATTCTGGAGAGTTCAAGGGACAAGGTAGTGGATGAGTTGGGGTTGGGTTTAGCCTTGGGTTTGGAGCAAACTCCATCAGTTTCAGCTTCATCTTCTCGTTCTTCTTCAGCTGGAAGAAGCTCTAAGAGATGGGTTTTCTTGAAGGATTTTCTCAGAAGCAAGAGTGAAGGAAGAAGCAACAACAAGTTCTGGTCCACCATTTCCTTCTCACCCATCAAGGAAAAGAAGAACAATCATCAGAATCTGCAGCAGCATTCAAAGGACAACAACAAGCCTAGTGAGAATCAGAGAAATAATGGGTCTTCTTCAACCAAAGGAAGCTCTCAAGGTTGGGCTAAGAAAATGACCGGAAAACCCACCAACGGCGTCGGGAAGCGGCGCGTGCCGGCGTCGCCGCATGAGTTGCTGTATAAAGCAAACAGGGCACAAGCTGAGGAGTTGAGGAAGAAAACCTTCTTGCCTTACAGGCAGGGTTTGTTTGGTTGCTTGGGGTTCAGTTCAAAGGGTTATGGAGCCATGAGTGGGTTTGCTAGAGCCTTAAACCCTGTTTCATCAAGAATCCGCGTGGTGTGGGGTGCCCTGTTATTAGTTGGCTCTGGTCCCATAGAAACAGTGAAGTCGATTTTCAGCCTGGGTTGGCCGCACCGCACAACTTGGTCGCAAATTTTGAGTTTAACTCTTACATCGATTGAGGGTTTGAATCATTTTCGCGTTAAGTAA 1218 0.5099 MELLQPPPTFDSTCSTPYVSAPSSPAGFYYSAPASPMHFAAITSSSEFEFSARFGSAALASSGAMTSADELFLNGQIRPMKLSTHLERPQLLAPLLDLEGEEEDEEVVVRGRDLRLRDKSVRRRTRSMSPLRNDTPLEWAESEEPEDKPNQTNDNNVDSNNGCSSEILESSRDKVVDELGLGLALGLEQTPSVSASSSRSSSAGRSSKRWVFLKDFLRSKSEGRSNNKFWSTISFSPIKEKKNNHQNLQQHSKDNNKPSENQRNNGSSSTKGSSQGWAKKMTGKPTNGVGKRRVPASPHELLYKANRAQAEELRKKTFLPYRQGLFGCLGFSSKGYGAMSGFARALNPVSSRIRVVWGALLLVGSGPIETVKSIFSLGWPHRTTWSQILSLTLTSIEGLNHFRVK* 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g1391 405 MobiDBLite consensus disorder prediction 240 296 - -
Lja5g1391 405 MobiDBLite consensus disorder prediction 137 151 - -
Lja5g1391 405 MobiDBLite consensus disorder prediction 240 281 - -
Lja5g1391 405 Pfam Protein of unknown function (DUF1645) 68 320 IPR012442 -
Lja5g1391 405 MobiDBLite consensus disorder prediction 121 165 - -
Lja5g1391 405 PANTHER - 10 348 - -
Lja5g1391 405 PANTHER STRESS RESPONSE NST1-LIKE PROTEIN (DUF1645) 10 348 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g1391 Lja-Chr5 13937898 13939646 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g1391 - - gmx:100805542 416.387
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g0546 1 4970757 4972265 Lja5g1391 5 13937898 13939646 ECH
Lja5g1391 5 13937898 13939646 Lja5g1391 5 13937898 13939646 ECH
Lja1g0546 1 4970757 4972265 Lja5g1391 5 13937898 13939646 PCT