Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g0546 ATGGAGCTTCAATCTGGCACCAACAATGGCGAAACCCAAACCTCTAACCTCGAATACATCGACGACAGCACGTGCTCCACTCCTTACGTCAGCGCCCCTTCCAGCCCCGGCCGCCGCGGCGGAGGTGAACCACCCATCTCCGGCTTCTTCTACAGCGCCCCCACCAGTCCACTGCACTTCGCCATAACCGCCGCTGCTTCCTCCTCCTCCTCCTTCCAGAACCCCTTTTCTTCAACTTCTTCCTCAGAGTTTGAATTCTCTGCCCGGTTCGGCTTTACCGGGTTCGGCGCTCCCGGTTCGATGAGCTCGGCTGATGAGCTGTTCTTGAACGGCCAGATCCGACCCATGAAGCTTTCGACCCACCTGGAGCGTCCCCAACTGCTCGATCTGGAAGAAGAAGAAGGAGAAGAAGAAACAGAGGTACGGGGTAGAGATTTGAGGTTGCGTGCTAAGTCTGTAAGGAGAAGAACCAGATCTCTGTCTCCTCTGAGAAACACGCATTTGCAGTGGACAGAGAATGAAAAGACCAGCAAAATCGAGGTAGAAGAAGAAGAAGAGGAAGAGGAGAATGTGGATGATGAAGTGGGTTTGGAGAAAACTCATTCAGCTTTAGCTTCTTCTTCGAGGTGTTCTTCAGCTGGGAGAAGCTCAAAGAGGTGGGTTTTCTTGAAGGATTTTCTCAGAAGCAAGAGTGAAGGAAGGAGCAACAACAAGTTCTGGTCCACCATTTCCTTCTCCCCCACCAAAGAAAAGAAAGCCGTGAGCCAAAATCAGGGAAATGGGTCTTCTTCTATGCAGAAATCCAAGGGAAGTTCACAAGCTTTTTCTAAGAAATTGACCGGAAAACCCTCCAACGGCGTCGCCGGAAAGAGGCGTGTGCCGCCGGCGTCGGCGCATGAGTTGCATTATAAAGCGAACAGAGCACAAGCAGAGGAGTTGAGGAAGAAGACATTTCTGCCTTATAGACAAGGTCTGCTTGGGTGCTTGGGATTTACTTCCAAGAGTTATGGTGCTATGAATGGTTTTGCTAGAGCCTTAAACCCTGTCTCTTCCAGGTAA 1059 0.5099 MELQSGTNNGETQTSNLEYIDDSTCSTPYVSAPSSPGRRGGGEPPISGFFYSAPTSPLHFAITAAASSSSSFQNPFSSTSSSEFEFSARFGFTGFGAPGSMSSADELFLNGQIRPMKLSTHLERPQLLDLEEEEGEEETEVRGRDLRLRAKSVRRRTRSLSPLRNTHLQWTENEKTSKIEVEEEEEEEENVDDEVGLEKTHSALASSSRCSSAGRSSKRWVFLKDFLRSKSEGRSNNKFWSTISFSPTKEKKAVSQNQGNGSSSMQKSKGSSQAFSKKLTGKPSNGVAGKRRVPPASAHELHYKANRAQAEELRKKTFLPYRQGLLGCLGFTSKSYGAMNGFARALNPVSSR* 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g0546 352 MobiDBLite consensus disorder prediction 179 193 - -
Lja1g0546 352 MobiDBLite consensus disorder prediction 250 302 - -
Lja1g0546 352 MobiDBLite consensus disorder prediction 165 210 - -
Lja1g0546 352 MobiDBLite consensus disorder prediction 250 280 - -
Lja1g0546 352 MobiDBLite consensus disorder prediction 1 48 - -
Lja1g0546 352 PANTHER EXPRESSED PROTEIN 22 347 - -
Lja1g0546 352 MobiDBLite consensus disorder prediction 1 33 - -
Lja1g0546 352 Pfam Protein of unknown function (DUF1645) 104 320 IPR012442 -
Lja1g0546 352 PANTHER - 22 347 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g0546 Lja-Chr1 4970757 4972265 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g0546 - - mtr:MTR_1g083860 377.096
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g0546 1 4970757 4972265 Lja5g1391 5 13937898 13939646 ECH
Lja1g0546 1 4970757 4972265 Lja1g0546 1 4970757 4972265 ECH
Lja1g0546 1 4970757 4972265 Lja5g1391 5 13937898 13939646 PCT