Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g1361 ATGTCTGTGGTCATCACCAATGAGATCAGAGCCAAATCAGAGATCTACCATGGAGACCTTCTCTGCCAAGAGAAATCCAAGGAACTGCTGAAGGAAATAGCCCTCCCCAATGGCCTTCTTCCATTGAAAGACATAGAGGAATGCGGTTACCACCGTGAAAGCGGTTTCGTGTGGCTGAAGCAGAAGAAAAGCAACACTCACAAGTTTGAGAAGATTGGCAAGCTGGTTTCTTATGCTACTGAGGTCACTGCCTATGTTGAGGTTGGGAAGATCAAGAAGCTCACCGGTGTGAAGACCAAGGAGCTTTTGGTTTGGATCACACTCAATGACATCTATGTGGATAATCCTCCTACCGGAAAGATCACATTTCAGACTCCTGCTGGGCTTTACAGGACATTTCCGGTCTCCGCTTTCGAGATTAAAGAGGAGAAGCCGGTTACCGGGGTGGTTAAGGAGGAAGAAAATAAACATGTGAAGGAAGCTGTTGGTGCTGCTGCTGGTGCTGTTCAAGTTAAAGAGGTCTGA 525 0.4705 MSVVITNEIRAKSEIYHGDLLCQEKSKELLKEIALPNGLLPLKDIEECGYHRESGFVWLKQKKSNTHKFEKIGKLVSYATEVTAYVEVGKIKKLTGVKTKELLVWITLNDIYVDNPPTGKITFQTPAGLYRTFPVSAFEIKEEKPVTGVVKEEENKHVKEAVGAAAGAVQVKEV* 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g1361 174 PANTHER PLANT/F25P12-18 PROTEIN 4 164 - -
Lja5g1361 174 SUPERFAMILY At5g01610-like 3 143 IPR036758 -
Lja5g1361 174 Pfam Protein of unknown function, DUF538 27 139 IPR007493 -
Lja5g1361 174 Gene3D - 7 149 IPR036758 -
Lja5g1361 174 PANTHER T31J12.3 PROTEIN-RELATED 4 164 IPR007493 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g1361 Lja-Chr5 13639369 13640475 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g1361 - - gmx:100500427 247.284
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g1361 5 13639369 13640475 Lja5g1361 5 13639369 13640475 ECH
Lja1g0537 1 4902290 4903126 Lja5g1361 5 13639369 13640475 PCT