Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g1356 ATGAACACAATCGCCCATATTCGCAACCGCACTCTAAAATCCGCATTTAGGGTTTTCACTGCTTCTAGAAATTCATCATACTTCGTGTTCCCACCTGCAAGATGCCACCATGCTCTTGCTAATTCCAGCAAACCTCGTTTCAACCATGACCGCACCAATCACTGCACAGTGGCAAATAGGGATATCTTCGACATTACCAGATTCGCCGTTCGGAATTTCTCAACTTCTGTTGAGACCCGTGTCAATGACAGCAATTTTCAGAGGATTTATATGCAGGGTGGTGGTGTGAATGTGAAACCATTGGATTTGGAGGTGGAAAGTGTTCATAAGGATGGTGAAGATGTTGTGGTTGAAGATGCTAGCAGTAGCACAGGTGTTCATAAGAGCATAGAGGAGGAAACAGATGTGGAGAAACAAGCATGGAAGTTATTGAGGGATTCTGTTGTGAGTTATTGTGGTAATCCTGTGGGGACTATGGCTGCGAAGGATCCGGGGGATAAGATGCCCTTGAATTATGATCAGGTCTTTATTCGGGATTTCGTGCCTTCGGCTCTTGCCTTCTTGCTTAGAGGAGAAAGTGAGATTGTTAAGAACTTTCTTCTTCATACTTTGCAATTGCAGAGTTGGGAGAAAACAGTGGACTGCTACAGTCCTGGACAGGGTTTGATGCCTGCTAGTTTCAAAGTTAGAACCGTAGCTCTTGATGAAAATAATAGTGAAGAAGTTTTAGATCCTGATTTTGGGGAGTCGGCTATTGGCCGTGTTGCACCTGTGGATTCAGGGTTGTGGTGGATCATCCTGTTGCGGGCTTATGGGAAGCTCACTGGTGACTACAGCTTGCAAGAAAGGGTGGATTTTCAAACTGGCTTGAAAATGATCCTTAACTTGTGTTTAACTGATGGTTTTGACATGTTTCCTTCTCTGCTAGTCACTGATGGATCTTGCATGATAGATAGGCGAATGGGCATTCATGGTCACCCACTTGAAATCCAAGCATTGTTTTACTCAGCTCTTCGCTGCTCACGTGAAATGCTTGCTGTAACTGATGGAACCAGTCATCTCATTCGAGCCATTAACAATAGACTCAGTGCTCTATCATTCCACATTAGAGAATATTATTGGGTGGATATGAAAAAGCTGAATGAAATATATAGGTATAAAACAGAAGAGTACTCTCTGGATGCCATCAACAAATTCAACATCTATCCAGAACAAATTCCTTTTTGGGTAATGGATTGGATTCCAGAAAAGGGTGGATATCTGATTGGAAATCTGCAGCCAGCTCACATGGATTTCAGGTTTTTTACACTTGGAAATCTTTGGTCTATTGTTTCATCTTTGGGCACCCCAAGACAGAATGATGCTATTTTAAATCTGATAGAAGCTAAATGGGATGATCTTGTGGGTCATATCCCTCTTAAGATATGCTATCCTGCCGTGGAAAATGAAGAGTGGCGCATAATTACCGGGAGCGACCCAAAGAATACCCCCTGGTCATATCACAATGGTGGATCTTGGCCAACACTGTTGTGGCAGTTCACACTGGCATGCATCAAAATGGGGAGAATTGAACTAGCCCAGAAAGCAGTTGATTTGGCTGAGAAAAGGCTGCCAGTTGATTCTTGGCCCGAGTATTATGATACCCGTTCTGGGAAATTTGTTGGAAAGCAAGCGCGGCTGTATCAAACATGGACCATAGCTGGGTTCCTCACATCCAAGATGCTTTTGAAGAATCCTGAAATGGCATCCATGTTATTCTGGGAGGAGGATTATGAACTTCTTGATATTTGTGCTTGTGGGCTTAAGAAGAGTGGCAGGAGAAAGTGCTCCCGTGTTGCTGCCAAGTCTCAGATTCTAGTGCGATGA 1866 0.4362 MNTIAHIRNRTLKSAFRVFTASRNSSYFVFPPARCHHALANSSKPRFNHDRTNHCTVANRDIFDITRFAVRNFSTSVETRVNDSNFQRIYMQGGGVNVKPLDLEVESVHKDGEDVVVEDASSSTGVHKSIEEETDVEKQAWKLLRDSVVSYCGNPVGTMAAKDPGDKMPLNYDQVFIRDFVPSALAFLLRGESEIVKNFLLHTLQLQSWEKTVDCYSPGQGLMPASFKVRTVALDENNSEEVLDPDFGESAIGRVAPVDSGLWWIILLRAYGKLTGDYSLQERVDFQTGLKMILNLCLTDGFDMFPSLLVTDGSCMIDRRMGIHGHPLEIQALFYSALRCSREMLAVTDGTSHLIRAINNRLSALSFHIREYYWVDMKKLNEIYRYKTEEYSLDAINKFNIYPEQIPFWVMDWIPEKGGYLIGNLQPAHMDFRFFTLGNLWSIVSSLGTPRQNDAILNLIEAKWDDLVGHIPLKICYPAVENEEWRIITGSDPKNTPWSYHNGGSWPTLLWQFTLACIKMGRIELAQKAVDLAEKRLPVDSWPEYYDTRSGKFVGKQARLYQTWTIAGFLTSKMLLKNPEMASMLFWEEDYELLDICACGLKKSGRRKCSRVAAKSQILVR* 622
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g1356 621 Pfam Alkaline and neutral invertase 140 579 IPR024746 GO:0033926
Lja5g1356 621 Gene3D - 171 571 IPR012341 GO:0005975
Lja5g1356 621 PANTHER ALKALINE/NEUTRAL INVERTASE A, MITOCHONDRIAL 59 620 - -
Lja5g1356 621 PANTHER - 59 620 IPR024746 GO:0033926
Lja5g1356 621 SUPERFAMILY Six-hairpin glycosidases 148 571 IPR008928 GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g1356 Lja-Chr5 13594030 13598182 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g1356 - - gmx:100797025 1045.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g0534 1 4887091 4890446 Lja5g1356 5 13594030 13598182 ECH
Lja5g1356 5 13594030 13598182 Lja5g1356 5 13594030 13598182 ECH
Lja1g0534 1 4887091 4890446 Lja5g1356 5 13594030 13598182 PCT