Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g1327 ATGGGAGACAAGGAGGTCAAAGAATGGAAGAGGAAACAGAAAGGTGGATTCAGAGCTTCCATGTTTGTCTTTGCATTGTCAGCATTGGACAACATGGGTTTTGTGGCCAACATGGTGAGCTTAGTTCTCTACTTTATAATGGTGATGCACTTTGATCTGGCCAGCAGTGCCAACACTCTGACAAACTTTATGGGTTCAACTTTCTTGCTCTCTCTTGTTGGTGGTTTCATCTCGGATACCTACTTGAACAGACTCACCACATGTTTGCTCTTTGGATCACTCGAAGTTCTGGCTTTGGTAATGCTGACAGTTCAAGCTGGTTTAGATAGTCTACACCCAGAAGCATGTGGCAAGTCAAGCTGTATCAAAGGAGGTATAGCAGTCATGTTGTACACATCACTGGGTTTGTTGGCATTGGGTTTGGGTGGAGTGAGAGGAGCCATGGTTGCATTTGGTGCTGACCAATTTGATGAGAAGGATCCAGTTGAAGCAAAAGCTCTTGCAACTTTTTTCAATTGGCTTTTGCTTAGTTCAACTCTGGGCTCAGTTGTTGGGGTAACTGGGGTTGTGTGGGTTAACATGCAAAAGGGTTGGCACTGGGGATTTTCCATAATAACTGTTGCTTCCTCCATTGGTTTTCTGATCCTTGCTCTTGGTAAACCATTTTACCGCATCAAAGCTCCTGGTGACAGCCCCATTTTGAGGATTGTTCAGGTTATTGTTGTGGCTTTTAAAAACAGAAATCTACCACTGCCAGAGTCTAATGAGCAACTTTATGAGGCCTATAAAGATGCTACAGTAGAGAAGATTGCACACACTAACCAGATGAGGTTTCTAGATAAAGCTACAATTCTTCAAGAAAACTTTGAACCAAGGCCATGGAAGGTCTGTACTGTGACACAAGTTGAAGAAGTGAAGATCCTAACCAGAATGTTACCCATACTAGCCAGCACCATCATAATGAACACTTGTTTAGCACAGCTTCAAACATTCTCAGTCAGTCAAGGGAGTGTGATGAGCAAGAAACTTGGTTCTTTTGAAGTGCCTTCACCATCCATACCTGTTATCCCCCTTTTTTTCTTATGCGTACTGATTCCAATTTACGAATTCATCTTCGTGCCATTCGCGCGGAAGATCACTAACCACCCCTCTGGTGTTACACAGCTTCAAAGAGTTGGTGTGGGGCTGGTACTTTCTTCAATTTCTATGGCAGTAGCTGGGATAATAGAAGTAAAAAGGAGGGACCAAGCAATAAAAGACCCATCAAAGCCAATAAGCCTATTTTGGCTATCCTTCCAATATGCTATATTTGGGGTTGCAGATATGTTCACTCTTATAGGACTCCTAGAATTCTTCTACAGAGAAGCACCTCCAACCATGAAATCACTTTCAACTTCTTTCACATATTTGTCCATGTCTCTTGGTTACTTCTTGAGCACAGTCGTTGTGAGTGTCATTAATACTGTTACCAAGAGGATTACTCCAAGCAAACAAGGATGGTTGTATGGAAGTGATTTAAACAAAAACAACCTCAACTTGTTCTATTGGTTCTTAGCAATCCTGAGCTGCCTTAATTTTTTCAACTTCCTTTACTGGGCCTCTTGCTACAAATACAAATCTGAAGACAACAGCTGTTCAAAGCTAAATGTGAAGGCTGTAGCTGAAACTACTGCAATAATGGTTGTTGATGAGAAAAAACATGATAAGGAAGACATGAAGGATCATGGAAGCACCCAAGATCTGAGAGCTAAGGCTAAAGAAAGCAACCAAACCAGTGAAGCCAATACTGAGGGACCCTCTTCCTCTGATGAAACAGATGATGGCAAACAAAAAGAAAGAAACTCTAGGGAATGGAAGGATAGATAA 1866 0.4191 MGDKEVKEWKRKQKGGFRASMFVFALSALDNMGFVANMVSLVLYFIMVMHFDLASSANTLTNFMGSTFLLSLVGGFISDTYLNRLTTCLLFGSLEVLALVMLTVQAGLDSLHPEACGKSSCIKGGIAVMLYTSLGLLALGLGGVRGAMVAFGADQFDEKDPVEAKALATFFNWLLLSSTLGSVVGVTGVVWVNMQKGWHWGFSIITVASSIGFLILALGKPFYRIKAPGDSPILRIVQVIVVAFKNRNLPLPESNEQLYEAYKDATVEKIAHTNQMRFLDKATILQENFEPRPWKVCTVTQVEEVKILTRMLPILASTIIMNTCLAQLQTFSVSQGSVMSKKLGSFEVPSPSIPVIPLFFLCVLIPIYEFIFVPFARKITNHPSGVTQLQRVGVGLVLSSISMAVAGIIEVKRRDQAIKDPSKPISLFWLSFQYAIFGVADMFTLIGLLEFFYREAPPTMKSLSTSFTYLSMSLGYFLSTVVVSVINTVTKRITPSKQGWLYGSDLNKNNLNLFYWFLAILSCLNFFNFLYWASCYKYKSEDNSCSKLNVKAVAETTAIMVVDEKKHDKEDMKDHGSTQDLRAKAKESNQTSEANTEGPSSSDETDDGKQKERNSREWKDR* 622
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g1327 621 MobiDBLite consensus disorder prediction 565 582 - -
Lja5g1327 621 MobiDBLite consensus disorder prediction 602 621 - -
Lja5g1327 621 Pfam POT family 87 499 IPR000109 GO:0016020|GO:0022857|GO:0055085
Lja5g1327 621 Gene3D MFS general substrate transporter like domains 1 544 IPR036259 -
Lja5g1327 621 SUPERFAMILY MFS general substrate transporter 10 533 IPR036259 -
Lja5g1327 621 MobiDBLite consensus disorder prediction 583 601 - -
Lja5g1327 621 PANTHER PEPTIDE/NITRATE TRANSPORTER 7 550 - -
Lja5g1327 621 MobiDBLite consensus disorder prediction 565 621 - -
Lja5g1327 621 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 7 550 IPR000109 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g1327 Lja-Chr5 13307280 13310990 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja5g1327 1 565 Organic Solute Cotransporters AT1G59740 40.206 1.49e-145 432
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g1327 K14638 - gmx:100812867 955.281
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g1327 5 13307280 13310990 Lja5g1327 5 13307280 13310990 ECH
Lja1g0502 1 4508356 4512475 Lja5g1327 5 13307280 13310990 PCT