Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g0502 ATGGCAGATCAAGAAGCAACAACAGAAGAACAGAAGCTGCTGGCACAATGGAAGAGAAGAAAAGGTGGATTCAGAGCTTCCATGTTCATTTTTGTGTTGTCAGCATTGGACAACATGGGTTTTGTGGCAAACATGGTGAGCTTAGTGCTGTATTTTTATATGGTGATGCACTTTGATCTGTCCAGTTCTGCCAACACTCTCACAAACTTTATGGGTTCAACTTTCTTGCTTTCCCTTGTTGGAGGCTTCATCTCAGACACTTACCTCAACAGATTCACCACATGCTTGCTTTTTGGATCACTTGAGGTTCTGGCTTTGACAATGCTCACAGTTCAAGCTGGTTCAGATCATCTACACCCAGATGCTTGTGGCAAGTCAAGCTGTGTGAAAGGTGGCATAGCATTCATGTTCTACACATCATTGTGTTTGATGGCATTGGGCATAGGAGGAGTCAGAGGATCCATGACACCATTTGGTGCTGACCAATTTGATGAAAAGGATCAAATTGAAGCAAAAGCACTTGCAAGCTTTTTCAATTGGCTTTTGCTCAGTTCAACTCTAGGAGCAATTACTGGTGTCACTGGTGTTGTGTGGGTTAGTACCCAAAGAGCTTGGCATTGGGGTTTTTTCATAATAACCATAGCGTCCTCTATTGGCTTTGTGATCCTTGCTCTTGGTAAGCCATTCTACCGCATCAAAATCCCTGGAGATAGCCCCACTTTGAGGATTGCTCAGGTTATTGTTGTGGCTTTTAAAAACAGAAAGCTGTCACTGCCAGAGTCACAGGAAGAACTATATGAGATCAGTGATAAAGATGCTGCAGTGGAGAAGATTGCCCACACCAACCAGATGAGGTCTCTAGATAAAGCAGCCATTCTCCAAGATAACTTAAAACCTCAGCCATGGAAGGTTTGCACGGTGACACAAGTTGAAGAAGTGAAGATCCTAACTAGAATGCTACCCATAGTAGCCAGCACAATCATAATGAACACATGTTTGGCACAGCTTCAAACATTCTCAGTTCAACAAGGGAATGTAATGAACCTAAAACTTGGCTCTTTTACAGTGCCTGCAGCATCCATTCCTGTTATCCCCCTTATTTTCATCAGCATCCTGGTTCCCTTGTATGAGTTGTTCTTCGTGCCATTCGCGCGAAAGATCACTCATCATCCTTCAGGAATCACACACCTTCAAAGGGTAGGTGTTGGTTTGGTACTCTCATCCATATCAATGGCAGTGGCTGGGATTATTGAGGTGAAAAGAAAAGACCAAGGAAGAAAAGACCCATCTAAGCCCATAAGCCTATTTTGGCTTTCTTTCCAATATGGTATATTTGGAATTGCTGACATGTTCACACTTGTTGGACTCCTTGAATTTTTCTACAGAGAATCACCTGCAAACATGAAATCACTCTCAACCTCTTTGACATGGTTATCAATGTCTCTTGGTTACTTCTTGAGCACTGTTTTTGTCAATGTCATCAATGCTATTACTAAAAGGATCACTCCTAGCAAACAAGGATGGTTGCATGGGTTTGACTTGAACCAAAATAATCTGAACCTTTTCTATTGGTTCCTAGCCATACTTAGCACACTTAATTTTTTCAACTACCTTTATTGGGCTTCCAGGTACAAGTACAAATCTGAAGAAAGCAATTCAAGCACAGGTTTTAATGGTTTAGTTGAAATGCATCTTGGGGCAAAGCAAGACTGGGAAGCCAATGGTGAAGGAACCACCCACCCATCGTGA 1749 0.4225 MADQEATTEEQKLLAQWKRRKGGFRASMFIFVLSALDNMGFVANMVSLVLYFYMVMHFDLSSSANTLTNFMGSTFLLSLVGGFISDTYLNRFTTCLLFGSLEVLALTMLTVQAGSDHLHPDACGKSSCVKGGIAFMFYTSLCLMALGIGGVRGSMTPFGADQFDEKDQIEAKALASFFNWLLLSSTLGAITGVTGVVWVSTQRAWHWGFFIITIASSIGFVILALGKPFYRIKIPGDSPTLRIAQVIVVAFKNRKLSLPESQEELYEISDKDAAVEKIAHTNQMRSLDKAAILQDNLKPQPWKVCTVTQVEEVKILTRMLPIVASTIIMNTCLAQLQTFSVQQGNVMNLKLGSFTVPAASIPVIPLIFISILVPLYELFFVPFARKITHHPSGITHLQRVGVGLVLSSISMAVAGIIEVKRKDQGRKDPSKPISLFWLSFQYGIFGIADMFTLVGLLEFFYRESPANMKSLSTSLTWLSMSLGYFLSTVFVNVINAITKRITPSKQGWLHGFDLNQNNLNLFYWFLAILSTLNFFNYLYWASRYKYKSEESNSSTGFNGLVEMHLGAKQDWEANGEGTTHPS* 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g0502 582 SUPERFAMILY MFS general substrate transporter 2 550 IPR036259 -
Lja1g0502 582 PANTHER PEPTIDE/NITRATE TRANSPORTER 11 558 - -
Lja1g0502 582 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 11 558 IPR000109 GO:0016020|GO:0022857|GO:0055085
Lja1g0502 582 Pfam POT family 92 507 IPR000109 GO:0016020|GO:0022857|GO:0055085
Lja1g0502 582 Gene3D MFS general substrate transporter like domains 2 553 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g0502 Lja-Chr1 4508356 4512475 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g0502 15 553 Organic Solute Cotransporters AT1G69850 42.907 4.56e-151 445
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g0502 K14638 - aprc:113861407 1004.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g0502 1 4508356 4512475 Lja1g0502 1 4508356 4512475 ECH
Lja1g0502 1 4508356 4512475 Lja5g1327 5 13307280 13310990 PCT