Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g1230 ATGGCAACAATAGCTGGTGTGAGCCTTTCAAGCCCTGGGGTACTTGCTAAAGGACCAGACTCACTGCAAAAGCAAAAGCCACAAGCCATCAGGTTCCCACAGTTGCTCAACCAAAGGTGTCCCGCTATGGTCCGGTCCGATCGGATGGTTAGCTTCCAACCCGTGCGCGCAGCACCGGAGGGAATATCAGGGAAGGTGGAGGAGAGCATCAAGAGTGCTGAGGAGACATGCTCGGAAAATGCTACCAGCGGCGAGTGTGCCGCGGCTTGGGATGAGGTGGAGGAGCTGAGCGCGGCGGCGAGCCACGCGAGGGACAAGCTGAAAGAAACCGACCCGCTTGAGAACTACTGCAAGGAGAACCCGGAGACTGATGAGTGCCGTACCTACGATAACTGA 396 0.5707 MATIAGVSLSSPGVLAKGPDSLQKQKPQAIRFPQLLNQRCPAMVRSDRMVSFQPVRAAPEGISGKVEESIKSAEETCSENATSGECAAAWDEVEELSAAASHARDKLKETDPLENYCKENPETDECRTYDN* 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g1230 131 SMART CP12_2 62 131 IPR003823 -
Lja5g1230 131 Pfam CP12 domain 62 130 - -
Lja5g1230 131 MobiDBLite consensus disorder prediction 1 25 - -
Lja5g1230 131 PANTHER CALVIN CYCLE PROTEIN CP12-2, CHLOROPLASTIC 1 131 IPR039314 -
Lja5g1230 131 PANTHER CALVIN CYCLE PROTEIN CP12-2, CHLOROPLASTIC 1 131 - -
Lja5g1230 131 MobiDBLite consensus disorder prediction 99 131 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g1230 Lja-Chr5 12370566 12372487 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g1230 - - lja:Lj5g3v1598470.1 191.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g0423 1 3726305 3727256 Lja5g1230 5 12370566 12372487 PCT