Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lja1g0423 | ATGGCAATGATAGCTGGTCTCAGCCTTTCAAGCCCCACGGTTTTCTTCAAGACTTCAGCCTCGCCGGCGCAACCCATCAAGCTCCACCCACTATTCATCCAAGGATCGCGCCCAGGCATGATGACCGGGTCGGGTCGAATGGCGATTGTGCGCCCCGTTCGCGCTGCGCCGGAGAGGATATCGGAGAAGGTGGAGGAAAGCATAAAGAACGCTAAGGAAACCTGCGCGGATGACCCGGTTAGCGGCGAGTGCGTGGCGGCGTGGGATGAGGTGGAGGAGCTGAGCGCGGCGGCGAGCCATGCAAGGGACAGGAAGAAGGAAACTGACCCGCTGGAGGATTACTGCAAGGACAACCCGGAGACTAAGGAGTGCAAAACTTTTGATGACTAA | 390 | 0.5821 | MAMIAGLSLSSPTVFFKTSASPAQPIKLHPLFIQGSRPGMMTGSGRMAIVRPVRAAPERISEKVEESIKNAKETCADDPVSGECVAAWDEVEELSAAASHARDRKKETDPLEDYCKDNPETKECKTFDD* | 130 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lja1g0423 | 129 | MobiDBLite | consensus disorder prediction | 96 | 129 | - | - | |
| Lja1g0423 | 129 | Pfam | CP12 domain | 60 | 128 | - | - | |
| Lja1g0423 | 129 | PANTHER | CALVIN CYCLE PROTEIN CP12-2, CHLOROPLASTIC | 1 | 129 | IPR039314 | - | |
| Lja1g0423 | 129 | SMART | CP12_2 | 60 | 129 | IPR003823 | - | |
| Lja1g0423 | 129 | PANTHER | CALVIN CYCLE PROTEIN CP12-1 | 1 | 129 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Lja1g0423 | Lja-Chr1 | 3726305 | 3727256 | Dispersed/Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Lja1g0423 | - | - | gmx:100812168 | 170.244 |
Event-related genes