Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g1223 ATGGGTAACCAAATTTCACTTCGTCCCTCTGATGCAACCTGCAAAATTGTTTTCTGGGACGGTTCGGTTCGCAAATTTGACCAACCGGTAATGGTAGCAGAGCTCATGTTGGAGCACCCTCAACAAGTAGTGGTTGAGTTTCAAGAAGGTGTGAGCCAGAGAAGGCCAACTCCATTGCCTGCTGACAAGAAGCTGGACATGAACAAGGTCTATTTGATGGTTCCGATGAAGCGAGGCAAGCCGGTCGGTTTGAGCTGCGAAGAGAGTCGCCGGATTCTCTTGATGGTTAACTCTGCTCTGCATTCTAAGTATCTTGCTTGTTCTTCAGGGTTTATGCCCCGGCTTCCCAGTTTGTGCCAGAACACTAGCATTGTGGAGGCGGGAACCGGAGTTGGTCGGAGAAAGAAAGAAGTGGAGATGGAGGAGAAGGAGGAGAGGGACCAGTTTGCTGAGATTTTAGCAGAGATGTCAGAGGGGAGGCCAGAGTATTTGAGTTTAAGTAGGCAGTTGTCAGGGAAGGAGTGGAAGCCTAGCTTGGACACCATTAAGGAGAAGAATATTGAGAAAAAGCTCTCCCACTGGTTGTTTGTCAAGAGTTTCTAG 603 0.4859 MGNQISLRPSDATCKIVFWDGSVRKFDQPVMVAELMLEHPQQVVVEFQEGVSQRRPTPLPADKKLDMNKVYLMVPMKRGKPVGLSCEESRRILLMVNSALHSKYLACSSGFMPRLPSLCQNTSIVEAGTGVGRRKKEVEMEEKEERDQFAEILAEMSEGRPEYLSLSRQLSGKEWKPSLDTIKEKNIEKKLSHWLFVKSF* 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g1223 200 PANTHER DUF4228 DOMAIN PROTEIN-RELATED 1 191 - -
Lja5g1223 200 PANTHER MULTIDRUG RESISTANCE PROTEIN ABC TRANSPORTER FAMILY PROTEIN 1 191 - -
Lja5g1223 200 Pfam PADRE domain 1 184 IPR025322 -
Lja5g1223 200 Coils Coil 135 155 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g1223 Lja-Chr5 12246710 12247663 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g1223 - - gmx:100784884 229.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g1223 5 12246710 12247663 Lja5g1223 5 12246710 12247663 ECH
Lja1g0416 1 3668678 3669431 Lja5g1223 5 12246710 12247663 PCT