Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g1210 ATGGCTACAGAAAACTCCATCATCACCAACATTAGTACTCCAAAACCACAAACAACCCTGGACAATAACGAACCTGCAGCTAATAAAGCCAAGAACATTTTTAAGGTGGCGCTGTTCATGATGCGTTCGCAAAAATCGCGAGTGGTTCCGGTGGATGAGGAGTCCAAGAGCGTGTGGAGGAAGCTGGTGGGGTCTATGAGGCCGTTGCACCTGCAAAGCAACAATTCTCCACCGGCTCAACCCAAGAATAATAGCAACCGGAAGCTGAAGAAGATGGTCACCATGCCGTGTAAAAGTGTTGCTAATTATTCCCTCAGCGAGGATGGGTTGGAATATGCTGCATCTGATTTTACTAATTCCCCGTCTCCATTACATCGCCGTTACGCTTCGGCCATTGGGCTGAGTGAAATGGTGCCCGAGGACGAGGAGAATGAGAAGGAGGAATATAATGTTATTGTTGAGAATGAGAATGAGGAGGAGGAAAGTGATGAAGGCGATGGTAATGGTGATGACATGATTGATGCCAAAGCTGAGGATTTTATTGCTCAGTTTTACCAGCAAATGAGGTTGCAGAGGTTGGATGTGGTGGATAGTCGTTACAATGAGATAAGTCAGAGGTCATTAGGGTTATGA 633 0.4613 MATENSIITNISTPKPQTTLDNNEPAANKAKNIFKVALFMMRSQKSRVVPVDEESKSVWRKLVGSMRPLHLQSNNSPPAQPKNNSNRKLKKMVTMPCKSVANYSLSEDGLEYAASDFTNSPSPLHRRYASAIGLSEMVPEDEENEKEEYNVIVENENEEEESDEGDGNGDDMIDAKAEDFIAQFYQQMRLQRLDVVDSRYNEISQRSLGL* 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g1210 210 MobiDBLite consensus disorder prediction 68 89 - -
Lja5g1210 210 MobiDBLite consensus disorder prediction 1 26 - -
Lja5g1210 210 PANTHER COTTON FIBER PROTEIN 16 205 - -
Lja5g1210 210 PANTHER COTTON FIBER PROTEIN 16 205 - -
Lja5g1210 210 MobiDBLite consensus disorder prediction 153 174 - -
Lja5g1210 210 MobiDBLite consensus disorder prediction 153 168 - -
Lja5g1210 210 Pfam Cotton fibre expressed protein 170 204 IPR008480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g1210 Lja-Chr5 12109190 12110190 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g1210 - - gmx:100800206 164.466
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g0410 1 3596757 3597269 Lja5g1210 5 12109190 12110190 PCT