Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g1179 ATGGCTCGCTCTTTCACCAACATCAAGGCTATCTCTGCTCTGGTAGCTGAAGAATTTTCCAACTCTCTTGCCAGGCGCGGGTACGCAGCAACAGCACAAAGTGCAGGTAGAGTTGGTGCCTCAATGAGTGGCAAGATGGGAAGTACTAAGTCAGGGGAAGAGAAGGCCGCAGCTCGTGAGAAGGTTTCATGGGTCCCAGACCCTGTCACCGGTTACTACAAGCCGGAGAATATCAAAGAGATTGATGTCGCGGAGCTGCGATCTGCGGTTCTGGGAAAAAATTGA 285 0.5158 MARSFTNIKAISALVAEEFSNSLARRGYAATAQSAGRVGASMSGKMGSTKSGEEKAAAREKVSWVPDPVTGYYKPENIKEIDVAELRSAVLGKN* 95
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g1179 94 PANTHER PROTEIN SENESCENCE-ASSOCIATED GENE 21, MITOCHONDRIAL 1 92 - -
Lja5g1179 94 MobiDBLite consensus disorder prediction 39 60 - -
Lja5g1179 94 Pfam Late embryogenesis abundant protein 1 91 IPR004926 -
Lja5g1179 94 PANTHER LATE EMBRYOGENIS ABUNDANT PROTEIN 2-RELATED 1 92 IPR004926 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g1179 Lja-Chr5 11841791 11843049 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g1179 - - gmx:100527032 121.709
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g0381 1 3342778 3343689 Lja5g1179 5 11841791 11843049 PCT