Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g0381 ATGGCTCGCTCTTTCGCTAACACCAAGGCTCTCTCTGCTCTACTCCTTGACGGAATCTCCACCTCTCTCACCAGACGCGGTTACTCTGCTGCTGCGGCAACACAAAGCGCAACAAGAGGATCAGGAATGACAAAGATGGGAGGGGAAGATAAAGGTGCTTCAACTTACAAGGTTTCATGGGTGCCGGACCCTGTCACTGGTTACTACAAACCAGAGAACACCAAGGAGGTTGTTGATGTTGCAGAAATGCGCGCTATGCTTCTCGCCAAAAAATTCAACAACTAA 285 0.4947 MARSFANTKALSALLLDGISTSLTRRGYSAAAATQSATRGSGMTKMGGEDKGASTYKVSWVPDPVTGYYKPENTKEVVDVAEMRAMLLAKKFNN* 95
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g0381 94 Pfam Late embryogenesis abundant protein 1 88 IPR004926 -
Lja1g0381 94 MobiDBLite consensus disorder prediction 30 51 - -
Lja1g0381 94 PANTHER LATE EMBRYOGENIS ABUNDANT PROTEIN 2-RELATED 1 91 IPR004926 -
Lja1g0381 94 PANTHER PROTEIN SENESCENCE-ASSOCIATED GENE 21, MITOCHONDRIAL-LIKE 1 91 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g0381 Lja-Chr1 3342778 3343689 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g0381 - - gmx:547566 122.094
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g0381 1 3342778 3343689 Lja5g1179 5 11841791 11843049 PCT