Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g1127 ATGATGATTCTTCAGATTTTATTTGGGGAATTCAAGGTTCTATTTTATTGTTTTATTCTTTGTCTTTTCCTATGTAGGTTGTTGTTGGTGGTGAATCTGAAATCTAAGAAAATAGTGAGGGATAGAATGGGTGAAATGAAGAAGAATCAACAGTCAAACTGGTGGTGGCTTGACAGTCATAGCACCACAAAACGATCCCCATGGCTTCAATCTACACTCACTGAGCTAAACGAGAAGACGAAGGCAATGTTGAAACTAATTGAAGAAGATGCAGATTCCTTTTCACAACGTGCAGAGATGTATTACAAGAAGAGACCAGAGCTCTTGAGAATGGTTGAAGATTTCTACAGGTCACACTGCTCGTTAGCGGAGCGATACGATCAAGTCAAACCCGACCCGGGAACTCGCCTTATGAAGACAAGGGTGTCCCCTTTTTCTTCACCCAAGTGTCATCAATCAGAGAAGTTTAAGAGCTTTTCTGATGATGGTTATTCTGAGAGTTGTGGTGCAGAGGAGGAGTCTGTGAAATCTGAAGTTGATGATCCTGAGCTTGAAGAGGATACTAAATCTAAAGTAGAGAAGGAAGTTCAGTTTGTGGCTGCAAATGAAGTGATGAGTCTGGGGGAGGAAATTGAGAGGCTTAGCGAAGAGAACAAGGCTCATGAGGAACAAATCAAGAAGAAAGAAAATGTTCATGATGAAGTAATGCTGTTGAGGGAAGAAATAGAACTGCTCAGGAAAGAGAATAAAGCTCAGAAAGATGAACTCAAGATGAAAGATACCATTTGCAATGAAGTGGTGGTGTTAAGGGAAGAGATAAAAAGATTCAGAGAAGAGAACAAGGCTCAGAAGGATCATCTCAAGCAGAAAGATGAAGAGAAAATAGAGGTGATAAGACACCTGAGTTTTGCAATCAATGTGCTGAAAGAGGAGAATGTGAAGATGAGAAGCTTCATTGCTAAGCAGGGTAAGGAGTTTGCCAAGAAATGGAAGAACCCATTTGAGTTCAATAAACTCATTGGATCACTACAAGGGAAGTTCCTCAATCTCAATGGGATTCCAAGGAAACATAAGCCTAGTGTTGTAGCTCTCTAG 1095 0.4055 MMILQILFGEFKVLFYCFILCLFLCRLLLVVNLKSKKIVRDRMGEMKKNQQSNWWWLDSHSTTKRSPWLQSTLTELNEKTKAMLKLIEEDADSFSQRAEMYYKKRPELLRMVEDFYRSHCSLAERYDQVKPDPGTRLMKTRVSPFSSPKCHQSEKFKSFSDDGYSESCGAEEESVKSEVDDPELEEDTKSKVEKEVQFVAANEVMSLGEEIERLSEENKAHEEQIKKKENVHDEVMLLREEIELLRKENKAQKDELKMKDTICNEVVVLREEIKRFREENKAQKDHLKQKDEEKIEVIRHLSFAINVLKEENVKMRSFIAKQGKEFAKKWKNPFEFNKLIGSLQGKFLNLNGIPRKHKPSVVAL* 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g1127 364 Coils Coil 204 293 - -
Lja5g1127 364 PANTHER PROTEIN NETWORKED 4A 51 363 - -
Lja5g1127 364 PANTHER PROTEIN NETWORKED 3A-RELATED 51 363 - -
Lja5g1127 364 MobiDBLite consensus disorder prediction 142 190 - -
Lja5g1127 364 ProSiteProfiles Networked (NET) actin-binding (NAB) domain profile. 52 133 IPR011684 GO:0003779
Lja5g1127 364 Pfam KIP1-like protein 54 127 IPR011684 GO:0003779
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g1127 Lja-Chr5 11307951 11310022 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g1127 - - lja:Lj5g3v1669350.2 694.886
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g1127 5 11307951 11310022 Lja5g1127 5 11307951 11310022 ECH
Lja1g0568 1 5159148 5161826 Lja5g1127 5 11307951 11310022 PCT