Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g0568 ATGCCTGAAATAACGAAGAATCAACCCTCACATTGGTGGTTTCTTGATAGCCACAGTAGTACTAAACGATCTCCATGGCTTCAATCCACTCTATCTGAGCTAAATGAGAAGACGAAGGCAATTTTAAAGTTAATTGAAGAAGATGCAGATTCCTTTGCCCAACGTGCAGAGATGTACTACAAGAAGCGACCGGAACTCGTGAGCATGGTTGAAGATTTCTACCGGACACACCGCTCACTAGCTGAGCGGTATGATCAAGTGAAACCTGACACCGGAATTAGCCATCTCACGACTGGAGGATCACCCTTTGCTTCAGCCAAATATCAAATAGAGAAGCTAATGAGTTTTGCAGATAATGGTTATGATACCTATTCTGAGGATTGTGCTATAGATGAGTATGAGGAATCTGAAGTTGATGATCCTGATCAGGAGCAAGAGGAGAGGGCCAAATTTCACAACTTCACAAAAGAAGAGCAAGTTTCATTTGTGGCTTCTGCCAATGAGGAAGTGATGAAGCTGAGGGATGAAATTAAGAGACTCAATGAAGAGACCAAGGTTAACAAGGATCAACTCAAGAAGAAGGATGCCATTTGTGATGAAGTGATAATGTTGAGGGAAGAAATAGAGAAACTTAGAGATGAGAATGAGGCACAGAAAGAAGAACTCAAGCAGAAGGATGTAGAGAAAATAGAGGTGATAAAACAACTGAGTTTAGCAATAGATATGCTGAAGCAGGAGAATGTAGAGATGAGAAACTTCATTGCTAAGGAGTCTACAAAGAAATGGAAGTACCCATTTGAGTTCAACAAACTTGTGGGAGCATTTTCAATGAAGTTGTTTCATGGAACTCCAAGGAATCAGCCCAGTGTTGAGCTCTCTAGGCGTGGTTTACAAAATTAG 900 0.4111 MPEITKNQPSHWWFLDSHSSTKRSPWLQSTLSELNEKTKAILKLIEEDADSFAQRAEMYYKKRPELVSMVEDFYRTHRSLAERYDQVKPDTGISHLTTGGSPFASAKYQIEKLMSFADNGYDTYSEDCAIDEYEESEVDDPDQEQEERAKFHNFTKEEQVSFVASANEEVMKLRDEIKRLNEETKVNKDQLKKKDAICDEVIMLREEIEKLRDENEAQKEELKQKDVEKIEVIKQLSLAIDMLKQENVEMRNFIAKESTKKWKYPFEFNKLVGAFSMKLFHGTPRNQPSVELSRRGLQN* 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g0568 299 Pfam KIP1-like protein 12 85 IPR011684 GO:0003779
Lja1g0568 299 PANTHER PROTEIN NETWORKED 3A-RELATED 10 290 - -
Lja1g0568 299 ProSiteProfiles Networked (NET) actin-binding (NAB) domain profile. 10 91 IPR011684 GO:0003779
Lja1g0568 299 PANTHER PROTEIN NETWORKED 4A 10 290 - -
Lja1g0568 299 Coils Coil 163 228 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g0568 Lja-Chr1 5159148 5161826 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g0568 - - gmx:100815707 468.388
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g0568 1 5159148 5161826 Lja1g0568 1 5159148 5161826 ECH
Lja1g0568 1 5159148 5161826 Lja5g1127 5 11307951 11310022 PCT