Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g1088 ATGCTGCAGAAACTGTGCTTGATGACTTCTCATGGTTGCCCTCCTGGGCTTGCTTTGCAGCAAGAACTTGCCATGATGGGCAGCATCATGAAGGCTTGTCAATGTCAACCACTATTGCCTTCTCCTTTACCAAAGCCAGAGATTTTGAGATATCAGTCTCCTAGTCTTAGGCTAAATCCATATGAGACAAGGATGATGCAAGATGAGTGGTTTAGCTGGAATCCGTTTGTTAATCTTGACATGTCAACTCTGAGGCCTGTGTTTCCTGTTATCCAAGAAACCTTTCCAAGAACAGTACTTTTCAGCCTTGGCGTCGTTAAACAATTCAATGAGCATGATCAATTTTTGCAGTCTATCACATCTGACACTGCTGAAGCAGGGCTAGGAGGAGCACATATAGATTTGTTGTCTAACCTGATGGATTTGCAATTGTCAGGCATTGATGAACGTCAACAACTATTTCCATCTCTTGTCTACCCAAATAGCAAATTGTACATCTCAAAGCCTTTGCTAGATATTTTTCAAAGTTCTGCCTTTAGTTCAAAGATTACCGTTCATCCAGATGGTCAAGTCACATTCATGGGTACAACAATTGAGATGAAAAATCTACTTTCTTTAGTTGCTGAGTCCTATTCATCAGAATGCACGATGCATATGGGTGAAAAACGGTCTATGGTTATTCCATACTTCACTAGGCTAAAGATCAAGAAAGTAGAGGCCAGAAGTCTTTCCTCGACATTGGATATTAATTCTACATTGGCTGTTCCTTTAAGGAGTCCTCAGAAGGTCAAAGTCAAGCAGTCACAAAAGAAGAACAATAAAGTAGCCAGGGAGAGGGATCTCTACAAGAAGAACTACGTACATGCATGTGAGAGCCTTCTGTTCTTGATGGTTGACAAGAGGCAAAATCGGAAAACAGCAATTCTCTCACTGAAGAAATCTGGTCCCGAGCTTCCTGACCTCCTCACGCAATTTTCTGCCGGCATTGCCGGTACCGGCCTTGCTGTCCTGCTAACTGTGGTCTGTAAGCTAGCTACCGGAAGGGTTCCCTTTTGCACGTCTAAGCTCTTCAGCACAGGGTTTGGGTTTGGGCTGGTTTGGCTTTCTTGGGCAGTAAACAAGCTAAGGGATACAATTGTAAACATAAGCAAGAATGCTGGGAAGATAGGACTGAAAGATGAAGAAATGATTCAAAAGGTGGATAACAACATAAGAGAAGTTTACTTCAGAGCCGCAGCATTGCTTGCAGTGGCAGTGCTAAGGCTTGCTTGA 1272 0.43 MLQKLCLMTSHGCPPGLALQQELAMMGSIMKACQCQPLLPSPLPKPEILRYQSPSLRLNPYETRMMQDEWFSWNPFVNLDMSTLRPVFPVIQETFPRTVLFSLGVVKQFNEHDQFLQSITSDTAEAGLGGAHIDLLSNLMDLQLSGIDERQQLFPSLVYPNSKLYISKPLLDIFQSSAFSSKITVHPDGQVTFMGTTIEMKNLLSLVAESYSSECTMHMGEKRSMVIPYFTRLKIKKVEARSLSSTLDINSTLAVPLRSPQKVKVKQSQKKNNKVARERDLYKKNYVHACESLLFLMVDKRQNRKTAILSLKKSGPELPDLLTQFSAGIAGTGLAVLLTVVCKLATGRVPFCTSKLFSTGFGFGLVWLSWAVNKLRDTIVNISKNAGKIGLKDEEMIQKVDNNIREVYFRAAALLAVAVLRLA* 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g1088 423 Coils Coil 265 285 - -
Lja5g1088 423 PANTHER PROTEIN, PUTATIVE-RELATED 2 423 - -
Lja5g1088 423 PANTHER OS05G0143300 PROTEIN 2 423 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g1088 Lja-Chr5 10889979 10893869 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g1088 - - lja:Lj5g3v1696930.1 719.539
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g1088 5 10889979 10893869 Lja5g1088 5 10889979 10893869 ECH
Lja1g1161 1 11908250 11911718 Lja5g1088 5 10889979 10893869 PCT