Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g1161 ATGCTGCAGAAACTGTCTTTGATGGCTTCTCATGGTTACCCTTCAGGTCTTCTCTTACATCAAGAACTGGGCTTGCCTGGCAGCTATATGAAGGGTTGTCAAACATTATTGCCTTCTCCAGTAGCTAAACCAGACATGATCAGATATCAATCTCCTTGTCTTAAGCCAAATCTATGTGAGGAGTTAACGAAAATCCGAAGTGATTGCTTTGATTGCAATCAGTTTGTCAATGCTGACTTCTCAACTCAAAGGCCTGTGCTTCTTGATGTCCAAGCCCCTTGCTCTGAAGCATTACTTTTTGGCTTTGGTATTGTTGAAAAATGCACTAAGCATGATCAAGTTTTAAACTTCCTAATGTCTGGGACTGCTGAAACTGGGATTGGTGGAGCAAATTTATCATTATTATCGGACTTGATGAGATTACAGTTGTCAGGCATGGATGATCCTCAGCAACCATTGGCATCTTTTATCTACCCATATAGCAAATTCGACATCCAGAAGTCTTTGCTGTATTTTGCTCAGGATCCAGCCCTTAGTTCAAAGATTACAGTTCTTCCAGATGGTCAAATCACGTTTATGGGTACTGGGATTGAGATGAAAGATCTTCTTTCTGTAGTTGCTGAGTCATACTTGACAAAAACCTTACATAAGGGCGAAAAACACTCGGTGCTTGTCCCTCACTTCATTAGGGTGAATATCAATGAAGCAGGGAGCAAAAGTCATTCCTCCACCTCAAATTTCCAATCTACCTTAACTGCTCCTTCAAGAAGGAGCGCAAGAATACTTTCCTTGATTGTTGCCCTTCCTGATAAAGTCAAACTCAAACCATCACAAAAAAAGAACAAGAAAATCAGCAGAGGGAGGGATCTCTACAAGAAGAACTATTCACAAGCATGTGAGATTCTTCTGTCCATGATGTTTGACAAGAAACAACGCCGGAAAACAGCAATCCCTTTGCTGAAGAAATGTGGCCCTGAGCTTCCTGAGCTCCTGACACAGTTTTCCGCTGCCATCGCCGGGACTGGCCTCGCTGTCCTCCTATCTGTATTCTGTGAGCTAGCTTGTGGAAGGGTTCATCTCTGTGCATCTAACGTGTTCAGCACTGGGTTAGGATTTGGGTTGGTTTGGCTTTCTTGGGCTGTAGTTAAGCTCAGGGCCACAATTACCAGCATCAGCAAAAATGCAGGTAAGTTGAGTTTTAAAGATGAGGACATGATTCAGAAACTGGATAGGAGCATCAGAGATATTTACTTCAGCGCTGCAGCGTTGCTAGCGGTGGCGGTGCTGAGACTTGCCTGA 1299 0.4342 MLQKLSLMASHGYPSGLLLHQELGLPGSYMKGCQTLLPSPVAKPDMIRYQSPCLKPNLCEELTKIRSDCFDCNQFVNADFSTQRPVLLDVQAPCSEALLFGFGIVEKCTKHDQVLNFLMSGTAETGIGGANLSLLSDLMRLQLSGMDDPQQPLASFIYPYSKFDIQKSLLYFAQDPALSSKITVLPDGQITFMGTGIEMKDLLSVVAESYLTKTLHKGEKHSVLVPHFIRVNINEAGSKSHSSTSNFQSTLTAPSRRSARILSLIVALPDKVKLKPSQKKNKKISRGRDLYKKNYSQACEILLSMMFDKKQRRKTAIPLLKKCGPELPELLTQFSAAIAGTGLAVLLSVFCELACGRVHLCASNVFSTGLGFGLVWLSWAVVKLRATITSISKNAGKLSFKDEDMIQKLDRSIRDIYFSAAALLAVAVLRLA* 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g1161 432 PANTHER OS05G0143300 PROTEIN 2 432 - -
Lja1g1161 432 PANTHER PROTEIN, PUTATIVE-RELATED 2 432 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g1161 Lja-Chr1 11908250 11911718 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g1161 - - aprc:113861385 540.421
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g1161 1 11908250 11911718 Lja1g1161 1 11908250 11911718 ECH
Lja1g1161 1 11908250 11911718 Lja5g1088 5 10889979 10893869 PCT